Basic Information
Locus ID:
gene:TRIDC5BG012530
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Belongs to the NPH3 family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 5B | 98182833 | 98188081 | + | gene:TRIDC5BG012530 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.88 | 67,468.67 Da | 38.68 | 87.38 | -0.23 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd18312 | BTB_POZ_NPY3-like | 20 | 123 | 4.78796E-45 | - |
| Pfam | PF00651 | BTB/POZ domain | 27 | 115 | 3.2E-7 | IPR000210 |
| Pfam | PF03000 | NPH3 family | 210 | 459 | 3.8E-86 | IPR027356 |
| SUPERFAMILY | SSF54695 | POZ domain | 21 | 116 | 2.67E-17 | IPR011333 |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 15 | 118 | 1.9E-12 | IPR011333 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 28 | 96 | 11.212689 | IPR000210 |
| ProSiteProfiles | PS51649 | NPH3 domain profile. | 210 | 483 | 89.330467 | IPR027356 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 497 | 535 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 505 | 529 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 582 | 621 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 551 | 621 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G14820.1 | Phototropic-responsive NPH3 family protein. A member of the NPY gene family (NPY1/AT4G31820, NPY2/AT2G14820, NPY3/AT5G67440, NPY4/AT2G23050, NPY5/AT4G37590). Involved in auxin-mediated organogenesis. | 0 |
| RefSeq | XP_037439592.1 | BTB/POZ domain-containing protein NPY4-like [Triticum dicoccoides] | 0 |
| O80970 | Phototropic-responsive NPH3 family protein NPY2 OS=Arabidopsis thaliana OX=3702 GN=NPY2 PE=2 SV=1 | 0 | |
| TrEMBL | A0A3B6LFF2 | BTB/POZ domain-containing protein NPY4 OS=Triticum aestivum OX=4565 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC5BG012530.