Basic Information
Locus ID:
gene:TRIDC5BG010700
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
E3 ubiquitin- protein ligase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 5B | 79925961 | 79931877 | + | gene:TRIDC5BG010700 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.76 | 43,804.73 Da | 56.04 | 76.93 | -0.64 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13923 | Zinc finger, C3HC4 type (RING finger) | 10 | 50 | 5.4E-8 | - |
| SUPERFAMILY | SSF57850 | RING/U-box | 4 | 59 | 4.01E-9 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 1 | 100 | 6.8E-16 | IPR013083 |
| SMART | SM00184 | ring_2 | 10 | 50 | 4.5E-4 | IPR001841 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 10 | 51 | 11.722122 | IPR001841 |
| ProSitePatterns | PS00518 | Zinc finger RING-type signature. | 26 | 35 | - | IPR017907 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 211 | 259 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 211 | 234 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 148 | 190 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 150 | 181 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 235 | 259 | - | - |
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G30580.1 | DREB2A-interacting protein 2. Encodes a C3HC4 RING-domain-containing ubiquitin E3 ligase capable of interacting with DREB2A. DRIP2 seems to be involved in regulating stress-related transcriptional changes and drought tolerance. | 0 |
| RefSeq | XP_037439483.1 | E3 ubiquitin protein ligase DRIP2-like [Triticum dicoccoides] | 0 |
| Q94AY3 | E3 ubiquitin protein ligase DRIP2 OS=Arabidopsis thaliana OX=3702 GN=DRIP2 PE=1 SV=1 | 0 | |
| TrEMBL | M7ZLA3 | E3 ubiquitin protein ligase DRIP2 OS=Triticum urartu OX=4572 GN=TRIUR3_28708 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC5BG010700.