Basic Information
Locus ID:
gene:TRIDC5BG009710
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
NB-ARC domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 5B | 70351706 | 70364780 | - | gene:TRIDC5BG009710 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.74 | 163,988.98 Da | 43.15 | 98.59 | -0.19 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 20 | 298 | 2.9E-52 | IPR000719 |
| Pfam | PF00931 | NB-ARC domain | 378 | 595 | 1.8E-38 | IPR002182 |
| SUPERFAMILY | SSF52047 | RNI-like | 1176 | 1355 | 5.73E-13 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 6 | 301 | 2.77E-66 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 698 | 1015 | 1.22E-44 | - |
| SUPERFAMILY | SSF52058 | L domain-like | 928 | 1224 | 4.76E-20 | - |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 356 | 629 | 1.71E-56 | IPR027417 |
| Gene3D | G3DSA:1.10.8.430 | - | 530 | 614 | 1.5E-8 | IPR042197 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 924 | 1218 | 3.4E-27 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 1 | 92 | 1.1E-20 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 112 | 315 | 2.5E-49 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 1224 | 1382 | 9.4E-17 | IPR032675 |
| Gene3D | G3DSA:3.40.50.300 | - | 354 | 520 | 2.2E-31 | IPR027417 |
| Gene3D | G3DSA:1.10.10.10 | - | 615 | 710 | 1.3E-9 | IPR036388 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 729 | 923 | 1.5E-33 | IPR032675 |
| SMART | SM00369 | LRR_typ_2 | 965 | 988 | 0.89 | IPR003591 |
| SMART | SM00220 | serkin_6 | 19 | 307 | 3.0E-36 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 766 | 788 | 160.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 1299 | 1322 | 300.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 941 | 964 | 83.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 19 | 307 | 38.081955 | IPR000719 |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 967 | 988 | 7.33462 | IPR001611 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 25 | 46 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 154 | 166 | - | IPR008271 |
| PRINTS | PR00364 | Disease resistance protein signature | 566 | 580 | 3.4E-16 | - |
| PRINTS | PR00364 | Disease resistance protein signature | 468 | 482 | 3.4E-16 | - |
| PRINTS | PR00364 | Disease resistance protein signature | 963 | 979 | 3.4E-16 | - |
| PRINTS | PR00364 | Disease resistance protein signature | 397 | 412 | 3.4E-16 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 346 | 363 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 346 | 368 | - | - |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G14470.1 | NB-ARC domain-containing disease resistance protein. | 0 |
| RefSeq | XP_037439418.1 | putative disease resistance protein RGA1 isoform X1 [Triticum dicoccoides] | 0 |
| Q7XA40 | Putative disease resistance protein RGA3 OS=Solanum bulbocastanum OX=147425 GN=RGA3 PE=2 SV=2 | 0 | |
| TrEMBL | A0A3B6LGP1 | Protein kinase domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC5BG009710.