halophFGD

Basic Information

Locus ID: gene:TRIDC5BG009690

Species & Taxonomic ID: Triticum dicoccoides & 85692

Genome Assembly: GCF_002162155.2

Short Name: IAA2

Description: Aux IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
5B	70032297	70033200	+	gene:TRIDC5BG009690

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
9.24	16,262.61 Da	45.20	68.37	-0.16

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
Pfam	PF02309	AUX/IAA family	1	149	1.9E-53	IPR033389
SUPERFAMILY	SSF54277	CAD & PB1 domains	53	141	3.09E-19	-
Gene3D	G3DSA:3.10.20.90	-	53	152	4.1E-37	-
ProSiteProfiles	PS51745	PB1 domain profile.	58	142	23.964085	IPR000270

Gene Ontology

Molecular Function:

GO:0005515 (protein binding)

KEGG Pathway

KO Term:

K14484 (auxin-responsive protein IAA)

Pathway:

ko04075 (Plant hormone signal transduction) map04075 (Plant hormone signal transduction)

Best hit

Source	Best Hit ID	Description
TAIR	AT1G04240.1	AUX/IAA transcriptional regulator family protein. SHY2/IAA3 regulates multiple auxin responses in roots. It is induced rapidly by IAA, and has been shown to be phosphorylated by oat phytochrome A in vitro.
RefSeq	XP_037439417.1	auxin-responsive protein IAA31-like [Triticum dicoccoides]
Swiss-Prot	P0C133	Auxin-responsive protein IAA31 OS=Oryza sativa subsp. japonica OX=39947 GN=IAA31 PE=2 SV=1
TrEMBL	A0A3B6LGU6	Auxin-responsive protein OS=Triticum aestivum OX=4565 PE=3 SV=1

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
No sample metadata found.

Network

No network data available for this species.

Orthology

No orthogroup found for gene:TRIDC5BG009690.