Basic Information
Locus ID:
gene:TRIDC5BG009520
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
WD40 repeats
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 5B | 68917682 | 68920585 | - | gene:TRIDC5BG009520 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.34 | 22,268.79 Da | 28.51 | 77.23 | -0.36 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF12894 | Anaphase-promoting complex subunit 4 WD40 domain | 86 | 145 | 2.0E-6 | IPR024977 |
| SUPERFAMILY | SSF117289 | Nucleoporin domain | 38 | 190 | 7.85E-24 | - |
| Gene3D | G3DSA:2.130.10.10 | - | 163 | 202 | 2.3E-7 | IPR015943 |
| Gene3D | G3DSA:2.130.10.10 | - | 24 | 162 | 1.6E-51 | IPR015943 |
| SMART | SM00320 | WD40_4 | 37 | 78 | 220.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 124 | 161 | 0.27 | IPR001680 |
| SMART | SM00320 | WD40_4 | 81 | 121 | 0.0015 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 89 | 130 | 10.107432 | IPR001680 |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G22910.1 | FIZZY-related 2. | 0 |
| RefSeq | XP_037441086.1 | protein FIZZY-RELATED 2-like [Triticum dicoccoides] | 0 |
| Q9M7I2 | B-type cell cycle switch protein ccs52A OS=Medicago truncatula OX=3880 GN=CCS52A PE=1 SV=1 | 0 | |
| TrEMBL | A0A3B6SLG8 | ANAPC4_WD40 domain-containing protein OS=Triticum aestivum OX=4565 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC5BG009520.