Basic Information
Locus ID:
gene:TRIDC5BG009500
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Salt stress response/antifungal
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 5B | 68690967 | 68693201 | + | gene:TRIDC5BG009500 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.23 | 80,644.58 Da | 43.36 | 85.37 | -0.17 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 405 | 673 | 6.86556E-85 | - |
| Pfam | PF01657 | Salt stress response/antifungal | 205 | 260 | 3.7E-6 | IPR002902 |
| Pfam | PF00069 | Protein kinase domain | 402 | 670 | 6.8E-43 | IPR000719 |
| Pfam | PF01657 | Salt stress response/antifungal | 45 | 139 | 1.3E-15 | IPR002902 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 382 | 691 | 1.37E-75 | IPR011009 |
| Gene3D | G3DSA:3.30.430.20 | - | 168 | 263 | 1.5E-15 | IPR038408 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 384 | 477 | 1.3E-29 | - |
| Gene3D | G3DSA:3.30.430.20 | - | 41 | 142 | 1.3E-18 | IPR038408 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 478 | 694 | 6.4E-58 | - |
| SMART | SM00220 | serkin_6 | 399 | 679 | 1.9E-35 | IPR000719 |
| ProSiteProfiles | PS51473 | Gnk2-homologous domain profile. | 39 | 142 | 17.222071 | IPR002902 |
| ProSiteProfiles | PS51473 | Gnk2-homologous domain profile. | 160 | 265 | 13.483553 | IPR002902 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 399 | 682 | 36.696823 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 521 | 533 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 405 | 429 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 286 | 302 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 286 | 305 | - | - |
| Coils | Coil | Coil | 278 | 307 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G10530.1 | Concanavalin A-like lectin protein kinase family protein. | 0 |
| RefSeq | XP_037437684.1 | cysteine-rich receptor-like protein kinase 25 [Triticum dicoccoides] | 0 |
| Q9LXA5 | L-type lectin-domain containing receptor kinase IX.1 OS=Arabidopsis thaliana OX=3702 GN=LECRK91 PE=1 SV=1 | 0 | |
| TrEMBL | A0A3B6MJP9 | Cysteine-rich receptor-like protein kinase 25 OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC5BG009500.