Basic Information
Locus ID:
gene:TRIDC5BG007100
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Speckle-type POZ protein-like protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 5B | 47070730 | 47072265 | + | gene:TRIDC5BG007100 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.95 | 38,906.59 Da | 44.80 | 93.89 | -0.02 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00121 | MATH | 26 | 148 | 7.62274E-19 | IPR002083 |
| Pfam | PF00917 | MATH domain | 29 | 149 | 3.3E-6 | IPR002083 |
| Pfam | PF00651 | BTB/POZ domain | 175 | 281 | 1.1E-24 | IPR000210 |
| SUPERFAMILY | SSF54695 | POZ domain | 156 | 281 | 6.67E-28 | IPR011333 |
| SUPERFAMILY | SSF49599 | TRAF domain-like | 19 | 155 | 3.43E-25 | - |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 154 | 277 | 6.5E-32 | IPR011333 |
| Gene3D | G3DSA:1.25.40.420 | - | 282 | 350 | 6.0E-19 | - |
| Gene3D | G3DSA:2.60.210.10 | Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A | 21 | 152 | 6.9E-24 | IPR008974 |
| SMART | SM00225 | BTB_4 | 178 | 283 | 5.1E-23 | IPR000210 |
| SMART | SM00061 | math_3 | 26 | 131 | 9.5E-4 | IPR002083 |
| ProSiteProfiles | PS50144 | MATH/TRAF domain profile. | 21 | 148 | 18.805634 | IPR002083 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 178 | 245 | 16.217733 | IPR000210 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G19000.1 | BTB-POZ and MATH domain 1. | 0 |
| RefSeq | XP_037439290.1 | BTB/POZ and MATH domain-containing protein 1-like [Triticum dicoccoides] | 0 |
| Q8L765 | BTB/POZ and MATH domain-containing protein 1 OS=Arabidopsis thaliana OX=3702 GN=BPM1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A3B6LG48 | Speckle-type POZ protein-like protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC5BG007100.