Basic Information
Locus ID:
gene:TRIDC5BG006060
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Speckle-type POZ protein-like protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 5B | 39770638 | 39771744 | + | gene:TRIDC5BG006060 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.47 | 40,728.16 Da | 40.52 | 93.59 | -0.06 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00121 | MATH | 18 | 149 | 2.04657E-24 | IPR002083 |
| CDD | cd18280 | BTB_POZ_BPM_plant | 175 | 289 | 4.13175E-48 | - |
| Pfam | PF00651 | BTB/POZ domain | 177 | 291 | 6.1E-24 | IPR000210 |
| SUPERFAMILY | SSF54695 | POZ domain | 168 | 291 | 1.73E-31 | IPR011333 |
| SUPERFAMILY | SSF49599 | TRAF domain-like | 16 | 157 | 3.6E-31 | - |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 162 | 287 | 3.5E-36 | IPR011333 |
| Gene3D | G3DSA:2.60.210.10 | Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A | 16 | 153 | 1.1E-28 | IPR008974 |
| Gene3D | G3DSA:1.25.40.420 | - | 292 | 360 | 1.3E-17 | - |
| SMART | SM00225 | BTB_4 | 186 | 292 | 3.4E-26 | IPR000210 |
| ProSiteProfiles | PS50144 | MATH/TRAF domain profile. | 17 | 148 | 18.422091 | IPR002083 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 186 | 253 | 18.410025 | IPR000210 |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G19000.1 | BTB-POZ and MATH domain 1. | 0 |
| RefSeq | XP_037438142.1 | BTB/POZ and MATH domain-containing protein 1-like [Triticum dicoccoides] | 0 |
| Q8L765 | BTB/POZ and MATH domain-containing protein 1 OS=Arabidopsis thaliana OX=3702 GN=BPM1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A3B6LE90 | Speckle-type POZ protein-like protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC5BG006060.