Basic Information
Locus ID:
gene:TRIDC5BG005800
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Calcium-binding EGF-like domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 5B | 37653972 | 37656607 | - | gene:TRIDC5BG005800 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.33 | 83,829.23 Da | 27.46 | 85.38 | -0.14 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00054 | EGF_CA | 307 | 345 | 4.99619E-5 | - |
| Pfam | PF00069 | Protein kinase domain | 435 | 703 | 5.4E-43 | IPR000719 |
| Pfam | PF13947 | Wall-associated receptor kinase galacturonan-binding | 33 | 97 | 4.4E-9 | IPR025287 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 417 | 707 | 2.7E-73 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 511 | 726 | 2.0E-48 | - |
| Gene3D | G3DSA:2.10.25.10 | Laminin | 263 | 355 | 9.0E-10 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 409 | 510 | 1.3E-28 | - |
| SMART | SM00181 | egf_5 | 310 | 356 | 4.4 | IPR000742 |
| SMART | SM00220 | serkin_6 | 435 | 708 | 1.4E-37 | IPR000719 |
| SMART | SM00179 | egfca_6 | 307 | 356 | 1.1E-6 | IPR001881 |
| SMART | SM00181 | egf_5 | 257 | 306 | 32.0 | IPR000742 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 435 | 708 | 36.258671 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 441 | 464 | - | IPR017441 |
| ProSitePatterns | PS01187 | Calcium-binding EGF-like domain signature. | 307 | 340 | - | IPR018097 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 556 | 568 | - | IPR008271 |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G21270.1 | wall-associated kinase 2. cytoplasmic serine/threonine protein kinase induced by salicylic acid. mutant plants exhibit a loss of cell expansion and dependence on sugars and salts for seedling growth, affecting the expression and activity of vacuolar invertase. | 0 |
| RefSeq | XP_044386681.1 | wall-associated receptor kinase 3-like [Triticum aestivum] | 0 |
| Q9LMP1 | Wall-associated receptor kinase 2 OS=Arabidopsis thaliana OX=3702 GN=WAK2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8I6Y687 | Protein kinase domain-containing protein OS=Hordeum vulgare subsp. vulgare OX=112509 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC5BG005800.