Basic Information
Locus ID:
gene:TRIDC5BG005520
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
WD40 repeats
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 5B | 36360061 | 36361911 | - | gene:TRIDC5BG005520 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.62 | 15,734.46 Da | 31.60 | 83.11 | -0.27 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | SSF50978 | WD40 repeat-like | 4 | 121 | 4.58E-17 | IPR036322 |
| Gene3D | G3DSA:2.130.10.10 | - | 2 | 140 | 1.6E-16 | IPR015943 |
| SMART | SM00320 | WD40_4 | 31 | 68 | 1.5 | IPR001680 |
| SMART | SM00320 | WD40_4 | 71 | 118 | 5.5E-4 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 99 | 120 | 9.672996 | IPR001680 |
| ProSitePatterns | PS00678 | Trp-Asp (WD) repeats signature. | 105 | 119 | - | IPR019775 |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G65030.1 | Transducin/WD40 repeat-like superfamily protein. This gene is predicted to encode a protein with a DWD motif. It can bind to DDB1a in Y2H assays, and DDB1b in co-IP assays, and may be involved in the formation of a CUL4-based E3 ubiquitin ligase | 0 |
| RefSeq | XP_037439219.1 | p21-activated protein kinase-interacting protein 1-like [Triticum dicoccoides] | 0 |
| TrEMBL | A0A3B6LFN6 | WD_REPEATS_REGION domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC5BG005520.