Basic Information
Locus ID:
gene:TRIDC5BG004250
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
A Receptor for Ubiquitination Targets
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 5B | 24885799 | 24888880 | - | gene:TRIDC5BG004250 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.66 | 98,257.46 Da | 55.31 | 81.62 | -0.21 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00646 | F-box domain | 34 | 75 | 4.4E-8 | IPR001810 |
| SUPERFAMILY | SSF81383 | F-box domain | 470 | 512 | 2.35E-7 | IPR036047 |
| SUPERFAMILY | SSF81383 | F-box domain | 34 | 77 | 5.76E-11 | IPR036047 |
| Gene3D | G3DSA:1.20.1280.50 | - | 19 | 71 | 3.1E-7 | - |
| SMART | SM00256 | fbox_2 | 465 | 504 | 0.96 | IPR001810 |
| SMART | SM00256 | fbox_2 | 35 | 75 | 9.1E-8 | IPR001810 |
| TIGRFAM | TIGR01640 | F_box_assoc_1: F-box protein interaction domain | 147 | 399 | 7.5E-13 | IPR017451 |
| ProSiteProfiles | PS50181 | F-box domain profile. | 34 | 74 | 9.894885 | IPR001810 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_037439168.1 | uncharacterized protein LOC119307178 [Triticum dicoccoides] | 0 |
| TrEMBL | A0A3B6LFQ8 | F-box domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC5BG004250.