Basic Information
Locus ID:
gene:TRIDC5BG002040
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 5B | 10716054 | 10719405 | - | gene:TRIDC5BG002040 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.60 | 106,425.55 Da | 32.87 | 96.97 | 0.12 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 692 | 994 | 7.41491E-88 | - |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 33 | 73 | 1.4E-9 | IPR013210 |
| Pfam | PF13855 | Leucine rich repeat | 513 | 571 | 2.8E-7 | IPR001611 |
| Pfam | PF00560 | Leucine Rich Repeat | 465 | 487 | 0.73 | IPR001611 |
| Pfam | PF00560 | Leucine Rich Repeat | 250 | 271 | 1.3 | IPR001611 |
| Pfam | PF00069 | Protein kinase domain | 688 | 991 | 9.0E-33 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 675 | 994 | 2.05E-63 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 63 | 376 | 3.15E-51 | - |
| SUPERFAMILY | SSF52058 | L domain-like | 294 | 592 | 2.24E-50 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 785 | 1004 | 9.9E-53 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 669 | 784 | 5.3E-14 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 369 | 610 | 3.4E-63 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 191 | 292 | 3.1E-29 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 293 | 368 | 3.7E-17 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 32 | 190 | 3.8E-24 | IPR032675 |
| SMART | SM00220 | serkin_6 | 686 | 998 | 1.2E-23 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 686 | 998 | 35.212753 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 692 | 714 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 833 | 845 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G09970.1 | Leucine-rich receptor-like protein kinase family protein. RLK7 belongs to a leucine-rich repeat class of receptor-likekinase (LRR-RLKs). It is involved in the control of germination speed and the tolerance to oxidant stress. | 0 |
| RefSeq | XP_037439029.1 | receptor-like protein kinase 7 [Triticum dicoccoides] | 0 |
| F4I2N7 | Receptor-like protein kinase 7 OS=Arabidopsis thaliana OX=3702 GN=RLK7 PE=1 SV=1 | 0 | |
| TrEMBL | A0A3B6LF71 | Protein kinase domain-containing protein OS=Triticum aestivum OX=4565 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC5BG002040.