Basic Information
Locus ID:
gene:TRIDC5BG001140
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
NB-ARC domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 5B | 6008260 | 6021057 | - | gene:TRIDC5BG001140 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.02 | 101,609.26 Da | 45.66 | 98.75 | -0.15 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00009 | AAA | 208 | 350 | 0.00265706 | - |
| Pfam | PF13855 | Leucine rich repeat | 778 | 818 | 6.6E-8 | IPR001611 |
| Pfam | PF00560 | Leucine Rich Repeat | 678 | 698 | 1.5 | IPR001611 |
| Pfam | PF00069 | Protein kinase domain | 3 | 129 | 1.4E-16 | IPR000719 |
| Pfam | PF00931 | NB-ARC domain | 229 | 454 | 2.9E-38 | IPR002182 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 2 | 177 | 2.67E-22 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 538 | 873 | 4.08E-48 | - |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 193 | 469 | 4.82E-51 | IPR027417 |
| Gene3D | G3DSA:1.10.8.430 | - | 365 | 454 | 2.1E-8 | IPR042197 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 1 | 146 | 3.6E-25 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 569 | 734 | 6.8E-30 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 735 | 904 | 7.5E-23 | IPR032675 |
| Gene3D | G3DSA:1.10.10.10 | - | 455 | 549 | 1.5E-8 | IPR036388 |
| Gene3D | G3DSA:3.40.50.300 | - | 193 | 358 | 5.7E-29 | IPR027417 |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 784 | 806 | 7.242212 | IPR001611 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 1 | 138 | 14.195497 | IPR000719 |
| PRINTS | PR00364 | Disease resistance protein signature | 233 | 248 | 3.3E-20 | - |
| PRINTS | PR00364 | Disease resistance protein signature | 303 | 317 | 3.3E-20 | - |
| PRINTS | PR00364 | Disease resistance protein signature | 401 | 415 | 3.3E-20 | - |
| PRINTS | PR00364 | Disease resistance protein signature | 804 | 820 | 3.3E-20 | - |
| Coils | Coil | Coil | 155 | 175 | - | - |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G14470.1 | NB-ARC domain-containing disease resistance protein. | 0 |
| RefSeq | XP_044394667.1 | putative disease resistance protein RGA1 isoform X1 [Triticum aestivum] | 0 |
| Q7XA40 | Putative disease resistance protein RGA3 OS=Solanum bulbocastanum OX=147425 GN=RGA3 PE=2 SV=2 | 0 | |
| TrEMBL | A0A3B6LDA0 | Protein kinase domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC5BG001140.