Basic Information
Locus ID:
gene:TRIDC5AG078180
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
meprin and TRAF homology
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 5A | 696991194 | 696993376 | - | gene:TRIDC5AG078180 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.82 | 43,384.74 Da | 36.76 | 90.13 | -0.09 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd18280 | BTB_POZ_BPM_plant | 180 | 290 | 2.42209E-46 | - |
| CDD | cd00121 | MATH | 29 | 152 | 1.07113E-25 | IPR002083 |
| Pfam | PF00651 | BTB/POZ domain | 184 | 292 | 1.5E-28 | IPR000210 |
| Pfam | PF00917 | MATH domain | 45 | 150 | 6.1E-10 | IPR002083 |
| SUPERFAMILY | SSF49599 | TRAF domain-like | 25 | 165 | 9.32E-32 | - |
| SUPERFAMILY | SSF54695 | POZ domain | 169 | 291 | 7.65E-34 | IPR011333 |
| Gene3D | G3DSA:2.60.210.10 | Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A | 26 | 159 | 8.1E-30 | IPR008974 |
| Gene3D | G3DSA:1.25.40.420 | - | 292 | 367 | 7.5E-18 | - |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 166 | 288 | 6.3E-37 | IPR011333 |
| SMART | SM00225 | BTB_4 | 191 | 293 | 2.6E-23 | IPR000210 |
| SMART | SM00061 | math_3 | 31 | 137 | 1.2E-10 | IPR002083 |
| ProSiteProfiles | PS50144 | MATH/TRAF domain profile. | 26 | 154 | 19.649426 | IPR002083 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 191 | 254 | 17.189787 | IPR000210 |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G06190.1 | BTB-POZ and MATH domain 2. | 0 |
| RefSeq | XP_037431840.1 | BTB/POZ and MATH domain-containing protein 2-like [Triticum dicoccoides] | 0 |
| Q9M8J9 | BTB/POZ and MATH domain-containing protein 2 OS=Arabidopsis thaliana OX=3702 GN=BPM2 PE=1 SV=1 | 0 | |
| TrEMBL | M8BU32 | Speckle-type POZ protein-like protein OS=Aegilops tauschii OX=37682 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC5AG078180.