Basic Information
Locus ID:
gene:TRIDC5AG078000
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Short Name:
DRM2
Description:
DNA (cytosine-5)-methyltransferase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 5A | 696146536 | 696151981 | - | gene:TRIDC5AG078000 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.56 | 68,078.85 Da | 38.72 | 73.95 | -0.47 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00145 | C-5 cytosine-specific DNA methylase | 489 | 605 | 7.6E-13 | IPR001525 |
| SUPERFAMILY | SSF53335 | S-adenosyl-L-methionine-dependent methyltransferases | 286 | 485 | 1.23E-22 | IPR029063 |
| SUPERFAMILY | SSF53335 | S-adenosyl-L-methionine-dependent methyltransferases | 488 | 604 | 5.38E-17 | IPR029063 |
| SUPERFAMILY | SSF46934 | UBA-like | 153 | 194 | 1.17E-5 | IPR009060 |
| Gene3D | G3DSA:3.40.50.150 | Vaccinia Virus protein VP39 | 284 | 389 | 1.7E-5 | - |
| Gene3D | G3DSA:1.10.8.10 | - | 162 | 194 | 1.5E-5 | - |
| Gene3D | G3DSA:3.40.50.150 | Vaccinia Virus protein VP39 | 476 | 613 | 5.9E-27 | - |
| ProSiteProfiles | PS50030 | Ubiquitin-associated domain (UBA) profile. | 163 | 193 | 9.149202 | IPR015940 |
| ProSiteProfiles | PS51679 | C-5 cytosine-specific DNA methylase (Dnmt) domain profile. | 488 | 613 | 21.313204 | IPR001525 |
| ProSiteProfiles | PS51680 | SAM-dependent methyltransferase DRM-type domain profile. | 285 | 611 | 127.772758 | IPR030380 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 236 | 265 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 22 | - | - |
Gene Ontology
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G14620.1 | domains rearranged methyltransferase 2. A putative DNA methyltransferase with rearranged catalytic domains; similar to mammalian DNMT3 methyltransferases; contains UBA domains. The 3'-end proximal part of the gene coding region is highly methylated at both adenine and cytosine residues. | 0 |
| RefSeq | XP_037437457.1 | DNA (cytosine-5)-methyltransferase DRM2-like [Triticum dicoccoides] | 0 |
| Q10SU5 | DNA (cytosine-5)-methyltransferase DRM2 OS=Oryza sativa subsp. japonica OX=39947 GN=DRM2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A3B6IWX4 | SAM-dependent MTase DRM-type domain-containing protein OS=Triticum aestivum OX=4565 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC5AG078000.