Basic Information
Locus ID:
gene:TRIDC5AG077410
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Ring finger domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 5A | 692854656 | 692859734 | + | gene:TRIDC5AG077410 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.03 | 59,436.04 Da | 48.89 | 77.31 | -0.36 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16450 | mRING-C3HGC3_RFWD3 | 62 | 109 | 1.84091E-20 | - |
| Pfam | PF13639 | Ring finger domain | 62 | 109 | 3.0E-9 | IPR001841 |
| SUPERFAMILY | SSF57850 | RING/U-box | 62 | 116 | 1.74E-14 | - |
| SUPERFAMILY | SSF50978 | WD40 repeat-like | 263 | 550 | 9.16E-10 | IPR036322 |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 56 | 189 | 3.2E-15 | IPR013083 |
| Gene3D | G3DSA:2.130.10.10 | - | 210 | 424 | 5.0E-8 | IPR015943 |
| SMART | SM00184 | ring_2 | 63 | 109 | 4.0E-4 | IPR001841 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 63 | 109 | 12.238477 | IPR001841 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 12 | 35 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 42 | - | - |
| Coils | Coil | Coil | 130 | 150 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G03450.1 | Transducin/WD40 repeat-like superfamily protein. | 0 |
| RefSeq | XP_037437433.1 | E3 ubiquitin-protein ligase RFWD3-like [Triticum dicoccoides] | 0 |
| A0A1L8GLK3 | E3 ubiquitin-protein ligase rfwd3.L OS=Xenopus laevis OX=8355 GN=rfwd3.L PE=1 SV=1 | 0 | |
| TrEMBL | A0A3B6KV56 | RING-type domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC5AG077410.