Basic Information
Locus ID:
gene:TRIDC5AG077400
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
MDM2/MDM4 family protein binding
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 5A | 692744311 | 692745605 | + | gene:TRIDC5AG077400 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.69 | 22,988.19 Da | 64.58 | 69.00 | -0.43 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13639 | Ring finger domain | 14 | 61 | 2.2E-8 | IPR001841 |
| SUPERFAMILY | SSF57850 | RING/U-box | 10 | 84 | 1.44E-12 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 11 | 75 | 5.8E-12 | IPR013083 |
| SMART | SM00184 | ring_2 | 15 | 61 | 0.0057 | IPR001841 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 15 | 62 | 11.51558 | IPR001841 |
| Coils | Coil | Coil | 110 | 134 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G03450.1 | Transducin/WD40 repeat-like superfamily protein. | 0 |
| RefSeq | XP_037437432.1 | uncharacterized protein LOC119304353 isoform X2 [Triticum dicoccoides] | 0 |
| A0A974CYQ5 | E3 ubiquitin-protein ligase rfwd3.S OS=Xenopus laevis OX=8355 GN=rfwd3.S PE=1 SV=1 | 0 | |
| TrEMBL | A0A8I6XM43 | RING-type domain-containing protein OS=Hordeum vulgare subsp. vulgare OX=112509 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC5AG077400.