Basic Information
Locus ID:
gene:TRIDC5AG077330
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
MDM2/MDM4 family protein binding
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 5A | 692265674 | 692271922 | - | gene:TRIDC5AG077330 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.47 | 49,299.21 Da | 51.69 | 71.10 | -0.35 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13445 | RING-type zinc-finger | 12 | 38 | 8.8E-4 | IPR027370 |
| Pfam | PF13639 | Ring finger domain | 255 | 304 | 1.6E-7 | IPR001841 |
| SUPERFAMILY | SSF57850 | RING/U-box | 255 | 308 | 8.83E-14 | - |
| SUPERFAMILY | SSF57850 | RING/U-box | 9 | 63 | 7.49E-8 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 213 | 330 | 3.6E-11 | IPR013083 |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 3 | 54 | 1.5E-7 | IPR013083 |
| SMART | SM00184 | ring_2 | 256 | 304 | 0.0017 | IPR001841 |
| SMART | SM00184 | ring_2 | 3 | 40 | 16.0 | IPR001841 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 256 | 304 | 11.530333 | IPR001841 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 192 | 209 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 184 | 209 | - | - |
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G03450.1 | Transducin/WD40 repeat-like superfamily protein. | 0 |
| RefSeq | XP_037431811.1 | uncharacterized protein LOC119298557 [Triticum dicoccoides] | 0 |
| A0A1L8GLK3 | E3 ubiquitin-protein ligase rfwd3.L OS=Xenopus laevis OX=8355 GN=rfwd3.L PE=1 SV=1 | 0 | |
| TrEMBL | A0A8R7URV6 | RING-type domain-containing protein OS=Triticum urartu OX=4572 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC5AG077330.