Basic Information
Locus ID:
gene:TRIDC5AG076450
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
WD40 repeats
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 5A | 689328265 | 689335248 | + | gene:TRIDC5AG076450 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.76 | 140,730.23 Da | 38.90 | 88.09 | -0.12 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00400 | WD domain, G-beta repeat | 143 | 176 | 0.012 | IPR001680 |
| SUPERFAMILY | SSF50978 | WD40 repeat-like | 23 | 411 | 4.76E-31 | IPR036322 |
| SUPERFAMILY | SSF50978 | WD40 repeat-like | 561 | 1219 | 8.55E-12 | IPR036322 |
| Gene3D | G3DSA:2.130.10.10 | - | 426 | 768 | 8.4E-9 | IPR015943 |
| Gene3D | G3DSA:2.130.10.10 | - | 975 | 1236 | 8.1E-9 | IPR015943 |
| Gene3D | G3DSA:2.130.10.10 | - | 14 | 198 | 2.2E-14 | IPR015943 |
| Gene3D | G3DSA:2.130.10.10 | - | 199 | 413 | 4.0E-17 | IPR015943 |
| SMART | SM00320 | WD40_4 | 1181 | 1219 | 100.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 138 | 177 | 7.3E-5 | IPR001680 |
| SMART | SM00320 | WD40_4 | 676 | 724 | 1.9 | IPR001680 |
| SMART | SM00320 | WD40_4 | 1105 | 1155 | 110.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 468 | 508 | 96.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 196 | 233 | 0.0025 | IPR001680 |
| SMART | SM00320 | WD40_4 | 18 | 57 | 0.0077 | IPR001680 |
| SMART | SM00320 | WD40_4 | 235 | 275 | 0.16 | IPR001680 |
| SMART | SM00320 | WD40_4 | 965 | 1003 | 6.5 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 983 | 1004 | 9.639578 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 145 | 176 | 12.045688 | IPR001680 |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 145 | 176 | 10.047417 | - |
| ProSitePatterns | PS00678 | Trp-Asp (WD) repeats signature. | 990 | 1004 | - | IPR019775 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1050 | 1075 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1027 | 1096 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G01860.1 | Transducin family protein / WD-40 repeat family protein. | 0 |
| RefSeq | XP_037433367.1 | uncharacterized protein LOC119300528 [Triticum dicoccoides] | 0 |
| TrEMBL | A0A8R7RES1 | WD_REPEATS_REGION domain-containing protein OS=Triticum urartu OX=4572 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC5AG076450.