Basic Information
Locus ID:
gene:TRIDC5AG074950
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
meprin and TRAF homology
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 5A | 679957241 | 679960075 | - | gene:TRIDC5AG074950 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.62 | 39,509.63 Da | 31.26 | 83.56 | -0.12 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00121 | MATH | 28 | 150 | 2.78514E-22 | IPR002083 |
| CDD | cd18280 | BTB_POZ_BPM_plant | 178 | 288 | 5.20995E-49 | - |
| Pfam | PF00917 | MATH domain | 46 | 148 | 2.2E-5 | IPR002083 |
| Pfam | PF00651 | BTB/POZ domain | 181 | 290 | 1.4E-27 | IPR000210 |
| SUPERFAMILY | SSF49599 | TRAF domain-like | 24 | 162 | 3.76E-30 | - |
| SUPERFAMILY | SSF54695 | POZ domain | 167 | 289 | 1.61E-35 | IPR011333 |
| Gene3D | G3DSA:2.60.210.10 | Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A | 25 | 157 | 1.2E-25 | IPR008974 |
| Gene3D | G3DSA:1.25.40.420 | - | 290 | 355 | 7.9E-17 | - |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 164 | 285 | 1.5E-39 | IPR011333 |
| SMART | SM00225 | BTB_4 | 189 | 291 | 2.1E-26 | IPR000210 |
| SMART | SM00061 | math_3 | 30 | 138 | 1.5E-5 | IPR002083 |
| ProSiteProfiles | PS50144 | MATH/TRAF domain profile. | 25 | 152 | 17.501589 | IPR002083 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 189 | 256 | 17.520699 | IPR000210 |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G06190.1 | BTB-POZ and MATH domain 2. | 0 |
| RefSeq | XP_037437292.1 | BTB/POZ and MATH domain-containing protein 2-like [Triticum dicoccoides] | 0 |
| Q9M8J9 | BTB/POZ and MATH domain-containing protein 2 OS=Arabidopsis thaliana OX=3702 GN=BPM2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A3B6KUK2 | Speckle-type POZ protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC5AG074950.