Basic Information
Locus ID:
gene:TRIDC5AG074880
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
WD40 repeats
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 5A | 679661048 | 679665158 | - | gene:TRIDC5AG074880 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.45 | 66,884.21 Da | 50.09 | 71.85 | -0.48 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00400 | WD domain, G-beta repeat | 225 | 259 | 6.0E-7 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 411 | 435 | 0.024 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 265 | 302 | 2.3E-5 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 123 | 155 | 5.0E-7 | IPR001680 |
| SUPERFAMILY | SSF50978 | WD40 repeat-like | 122 | 592 | 1.47E-55 | IPR036322 |
| Gene3D | G3DSA:2.130.10.10 | - | 111 | 366 | 5.2E-45 | IPR015943 |
| Gene3D | G3DSA:2.130.10.10 | - | 367 | 593 | 3.0E-6 | IPR015943 |
| SMART | SM00320 | WD40_4 | 222 | 260 | 5.8E-8 | IPR001680 |
| SMART | SM00320 | WD40_4 | 304 | 343 | 2.7 | IPR001680 |
| SMART | SM00320 | WD40_4 | 263 | 302 | 6.2E-10 | IPR001680 |
| SMART | SM00320 | WD40_4 | 112 | 156 | 2.8E-8 | IPR001680 |
| SMART | SM00320 | WD40_4 | 395 | 435 | 0.23 | IPR001680 |
| SMART | SM00320 | WD40_4 | 554 | 593 | 42.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 358 | 394 | 10.0 | IPR001680 |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 229 | 261 | 9.230148 | - |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 124 | 157 | 12.472858 | - |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 269 | 304 | 12.446706 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 414 | 435 | 9.672996 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 124 | 165 | 15.521181 | IPR001680 |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 269 | 304 | 10.363778 | - |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 229 | 269 | 11.07656 | IPR001680 |
| PRINTS | PR00320 | G protein beta WD-40 repeat signature | 143 | 157 | 7.8E-6 | IPR020472 |
| PRINTS | PR00320 | G protein beta WD-40 repeat signature | 247 | 261 | 7.8E-6 | IPR020472 |
| PRINTS | PR00320 | G protein beta WD-40 repeat signature | 289 | 303 | 7.8E-6 | IPR020472 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 29 | 52 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 30 | 50 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G24320.1 | Transducin/WD40 repeat-like superfamily protein. | 0 |
| RefSeq | XP_037437288.1 | uncharacterized protein LOC119304217 [Triticum dicoccoides] | 0 |
| Q498F0 | WD repeat-containing protein 44 OS=Xenopus laevis OX=8355 GN=wdr44 PE=2 SV=1 | 0 | |
| TrEMBL | A0A3B6KS58 | WD_REPEATS_REGION domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC5AG074880.