Basic Information
Locus ID:
gene:TRIDC5AG073950
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 5A | 673550321 | 673554119 | + | gene:TRIDC5AG073950 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.99 | 120,191.69 Da | 42.57 | 106.06 | 0.10 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF12799 | Leucine Rich repeats (2 copies) | 418 | 451 | 6.3E-7 | IPR025875 |
| Pfam | PF13855 | Leucine rich repeat | 662 | 720 | 2.4E-6 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 152 | 211 | 6.3E-9 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 516 | 575 | 1.2E-6 | IPR001611 |
| Pfam | PF00069 | Protein kinase domain | 833 | 1093 | 2.1E-39 | IPR000719 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 35 | 74 | 8.2E-11 | IPR013210 |
| Pfam | PF00560 | Leucine Rich Repeat | 298 | 318 | 0.37 | IPR001611 |
| SUPERFAMILY | SSF52047 | RNI-like | 299 | 719 | 1.1E-66 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 814 | 1090 | 7.15E-63 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 32 | 290 | 6.38E-59 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 295 | 435 | 6.8E-36 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 913 | 1105 | 2.8E-49 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 792 | 912 | 9.1E-21 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 436 | 758 | 4.0E-91 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 191 | 294 | 7.2E-27 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 33 | 190 | 4.4E-49 | IPR032675 |
| SMART | SM00365 | LRR_sd22_2 | 490 | 516 | 600.0 | - |
| SMART | SM00365 | LRR_sd22_2 | 174 | 200 | 740.0 | - |
| SMART | SM00369 | LRR_typ_2 | 438 | 460 | 37.0 | IPR003591 |
| SMART | SM00365 | LRR_sd22_2 | 294 | 320 | 270.0 | - |
| SMART | SM00365 | LRR_sd22_2 | 538 | 559 | 85.0 | - |
| SMART | SM00369 | LRR_typ_2 | 126 | 150 | 55.0 | IPR003591 |
| SMART | SM00365 | LRR_sd22_2 | 438 | 467 | 22.0 | - |
| SMART | SM00369 | LRR_typ_2 | 318 | 342 | 81.0 | IPR003591 |
| SMART | SM00220 | serkin_6 | 831 | 1097 | 7.5E-23 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 538 | 561 | 38.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 586 | 610 | 44.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 489 | 514 | 340.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 198 | 222 | 98.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 707 | 731 | 280.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 635 | 659 | 22.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 174 | 197 | 330.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 831 | 1097 | 34.279911 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 962 | 974 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 837 | 860 | - | IPR017441 |
| PRINTS | PR00019 | Leucine-rich repeat signature | 438 | 451 | 1.3E-5 | - |
| PRINTS | PR00019 | Leucine-rich repeat signature | 177 | 190 | 1.3E-5 | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G47110.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_044384087.1 | receptor kinase-like protein Xa21 [Triticum aestivum] | 0 |
| Q2R2D5 | Receptor kinase-like protein Xa21 OS=Oryza sativa subsp. japonica OX=39947 GN=XA21 PE=1 SV=1 | 0 | |
| TrEMBL | A0A3B6KTW1 | Protein kinase domain-containing protein OS=Triticum aestivum OX=4565 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC5AG073950.