Basic Information
Locus ID:
gene:TRIDC5AG071590
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Leucine Rich repeat
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 5A | 659928932 | 659931639 | - | gene:TRIDC5AG071590 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.69 | 70,362.85 Da | 44.75 | 109.13 | 0.13 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13516 | Leucine Rich repeat | 506 | 527 | 0.29 | IPR001611 |
| Pfam | PF13516 | Leucine Rich repeat | 375 | 397 | 0.29 | IPR001611 |
| Pfam | PF13516 | Leucine Rich repeat | 400 | 423 | 0.23 | IPR001611 |
| Pfam | PF00646 | F-box domain | 22 | 54 | 5.1E-4 | IPR001810 |
| SUPERFAMILY | SSF52047 | RNI-like | 311 | 574 | 3.45E-31 | - |
| SUPERFAMILY | SSF81383 | F-box domain | 8 | 55 | 1.7E-8 | IPR036047 |
| SUPERFAMILY | SSF52047 | RNI-like | 44 | 268 | 8.24E-13 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 480 | 586 | 3.2E-7 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 45 | 479 | 3.2E-51 | IPR032675 |
| SMART | SM00367 | LRR_CC_2 | 451 | 475 | 710.0 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 504 | 529 | 64.0 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 323 | 348 | 0.0052 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 478 | 503 | 100.0 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 401 | 425 | 130.0 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 375 | 400 | 10.0 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 105 | 130 | 37.0 | IPR006553 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 612 | 641 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 612 | 630 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G17020.1 | F-box/RNI-like superfamily protein. | 0 |
| RefSeq | XP_037437085.1 | F-box/LRR-repeat protein 10-like isoform X1 [Triticum dicoccoides] | 0 |
| Q9SDA8 | F-box/LRR-repeat protein 10 OS=Arabidopsis thaliana OX=3702 GN=FBL10 PE=2 SV=1 | 0 | |
| TrEMBL | A0A3B6KQU5 | F-box domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC5AG071590.