Basic Information
Locus ID:
gene:TRIDC5AG070860
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Ubiquitin associated domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 5A | 657993473 | 658001131 | - | gene:TRIDC5AG070860 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.05 | 60,036.09 Da | 34.97 | 72.69 | -0.30 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14399 | UBA_PLICs | 523 | 562 | 1.14441E-17 | - |
| Pfam | PF00627 | UBA/TS-N domain | 524 | 560 | 8.2E-11 | IPR015940 |
| Pfam | PF00240 | Ubiquitin family | 32 | 96 | 1.8E-17 | IPR000626 |
| SUPERFAMILY | SSF54236 | Ubiquitin-like | 23 | 110 | 8.29E-21 | IPR029071 |
| SUPERFAMILY | SSF46934 | UBA-like | 520 | 562 | 8.36E-15 | IPR009060 |
| Gene3D | G3DSA:3.10.20.90 | - | 26 | 111 | 1.4E-18 | - |
| Gene3D | G3DSA:1.10.8.10 | - | 510 | 565 | 1.5E-22 | - |
| Gene3D | G3DSA:1.10.260.100 | - | 191 | 249 | 4.0E-11 | - |
| SMART | SM00727 | CBM | 196 | 235 | 3.2E-9 | IPR006636 |
| SMART | SM00727 | CBM | 426 | 461 | 1.7E-4 | IPR006636 |
| SMART | SM00213 | ubq_7 | 27 | 98 | 1.4E-14 | IPR000626 |
| SMART | SM00727 | CBM | 380 | 422 | 1.3 | IPR006636 |
| SMART | SM00165 | uba_6 | 524 | 562 | 4.8E-7 | IPR015940 |
| SMART | SM00727 | CBM | 142 | 183 | 0.3 | IPR006636 |
| ProSiteProfiles | PS50053 | Ubiquitin domain profile. | 27 | 96 | 18.911144 | IPR000626 |
| ProSiteProfiles | PS50030 | Ubiquitin-associated domain (UBA) profile. | 519 | 563 | 13.293904 | IPR015940 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 294 | 308 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 294 | 317 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G17190.1 | ubiquitin family protein. | 0 |
| RefSeq | XP_044383894.1 | ubiquitin domain-containing protein DSK2a-like isoform X1 [Triticum aestivum] | 0 |
| Q9SII9 | Ubiquitin domain-containing protein DSK2a OS=Arabidopsis thaliana OX=3702 GN=DSK2A PE=1 SV=2 | 0 | |
| TrEMBL | M8AUC3 | Ubiquitin-like domain-containing protein OS=Aegilops tauschii OX=37682 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC5AG070860.