Basic Information
Locus ID:
gene:TRIDC5AG069040
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Legume lectin domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 5A | 648400387 | 648402532 | + | gene:TRIDC5AG069040 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.51 | 75,251.32 Da | 45.50 | 92.44 | 0.02 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 375 | 645 | 5.9953E-90 | - |
| CDD | cd06899 | lectin_legume_LecRK_Arcelin_ConA | 36 | 281 | 7.75761E-80 | IPR001220 |
| Pfam | PF00069 | Protein kinase domain | 374 | 641 | 2.8E-46 | IPR000719 |
| Pfam | PF00139 | Legume lectin domain | 35 | 292 | 8.4E-65 | IPR001220 |
| SUPERFAMILY | SSF49899 | Concanavalin A-like lectins/glucanases | 35 | 297 | 8.86E-64 | IPR013320 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 348 | 644 | 3.1E-78 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 446 | 660 | 2.4E-57 | - |
| Gene3D | G3DSA:2.60.120.200 | - | 34 | 280 | 2.5E-60 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 356 | 445 | 1.8E-28 | - |
| SMART | SM00220 | serkin_6 | 369 | 643 | 3.2E-37 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 369 | 650 | 36.244537 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 490 | 502 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 375 | 398 | - | IPR017441 |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G37710.1 | receptor lectin kinase. Induced in response to Salicylic acid. | 0 |
| RefSeq | XP_037433247.1 | L-type lectin-domain containing receptor kinase SIT2-like [Triticum dicoccoides] | 0 |
| Q7XUN6 | L-type lectin-domain containing receptor kinase SIT2 OS=Oryza sativa subsp. japonica OX=39947 GN=SIT2 PE=2 SV=2 | 0 | |
| TrEMBL | A0A3B6KST3 | Protein kinase domain-containing protein OS=Triticum aestivum OX=4565 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC5AG069040.