Basic Information
Locus ID:
gene:TRIDC5AG069030
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
U-box domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 5A | 647932631 | 647935204 | + | gene:TRIDC5AG069030 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.88 | 23,968.68 Da | 55.35 | 60.93 | -0.84 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF04564 | U-box domain | 140 | 200 | 3.2E-11 | IPR003613 |
| SUPERFAMILY | SSF57850 | RING/U-box | 140 | 205 | 6.48E-16 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 137 | 205 | 3.0E-16 | IPR013083 |
| SMART | SM00504 | Ubox_2 | 143 | 205 | 1.7E-9 | IPR003613 |
| ProSiteProfiles | PS51698 | U-box domain profile. | 139 | 205 | 12.129221 | IPR003613 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 34 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 38 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G54790.2 | ARM repeat superfamily protein. | 0 |
| RefSeq | XP_037431679.1 | U-box domain-containing protein 36-like [Triticum dicoccoides] | 0 |
| Q8GWV5 | U-box domain-containing protein 3 OS=Arabidopsis thaliana OX=3702 GN=PUB3 PE=2 SV=2 | 0 | |
| TrEMBL | A0A8R7QK81 | U-box domain-containing protein OS=Triticum urartu OX=4572 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC5AG069030.