Basic Information
Locus ID:
gene:TRIDC5AG062580
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Speckle-type POZ protein-like protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 5A | 613081531 | 613082966 | + | gene:TRIDC5AG062580 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.45 | 47,906.72 Da | 43.96 | 86.53 | -0.10 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd18280 | BTB_POZ_BPM_plant | 253 | 360 | 4.73289E-44 | - |
| CDD | cd00121 | MATH | 107 | 235 | 1.67322E-30 | IPR002083 |
| Pfam | PF00917 | MATH domain | 119 | 235 | 3.9E-6 | IPR002083 |
| Pfam | PF00651 | BTB/POZ domain | 255 | 362 | 3.4E-25 | IPR000210 |
| SUPERFAMILY | SSF54695 | POZ domain | 245 | 361 | 1.97E-31 | IPR011333 |
| SUPERFAMILY | SSF49599 | TRAF domain-like | 104 | 240 | 2.45E-36 | - |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 240 | 358 | 8.9E-35 | IPR011333 |
| Gene3D | G3DSA:2.60.210.10 | Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A | 104 | 239 | 1.2E-32 | IPR008974 |
| Gene3D | G3DSA:1.25.40.420 | - | 363 | 434 | 7.6E-16 | - |
| SMART | SM00225 | BTB_4 | 264 | 363 | 1.7E-23 | IPR000210 |
| SMART | SM00061 | math_3 | 110 | 217 | 4.8E-4 | IPR002083 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 264 | 331 | 17.024332 | IPR000210 |
| ProSiteProfiles | PS50144 | MATH/TRAF domain profile. | 105 | 234 | 22.410933 | IPR002083 |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G06190.1 | BTB-POZ and MATH domain 2. | 0 |
| RefSeq | XP_037431564.1 | BTB/POZ and MATH domain-containing protein 2-like [Triticum dicoccoides] | 0 |
| Q9M8J9 | BTB/POZ and MATH domain-containing protein 2 OS=Arabidopsis thaliana OX=3702 GN=BPM2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A3B6KNI4 | Speckle-type POZ protein-like protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC5AG062580.