Basic Information
Locus ID:
gene:TRIDC5AG061750
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Lipopolysaccharide kinase (Kdo/WaaP) family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 5A | 607036425 | 607042503 | - | gene:TRIDC5AG061750 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.23 | 61,835.69 Da | 46.09 | 83.46 | -0.36 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00051 | EFh | 475 | 535 | 1.03986E-19 | IPR002048 |
| CDD | cd05117 | STKc_CAMK | 97 | 355 | 5.22565E-138 | - |
| Pfam | PF00069 | Protein kinase domain | 97 | 356 | 1.1E-73 | IPR000719 |
| Pfam | PF13499 | EF-hand domain pair | 404 | 464 | 1.2E-11 | IPR002048 |
| Pfam | PF13499 | EF-hand domain pair | 473 | 535 | 3.3E-14 | IPR002048 |
| SUPERFAMILY | SSF47473 | EF-hand | 396 | 536 | 5.98E-46 | IPR011992 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 97 | 357 | 5.4E-81 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 183 | 362 | 7.1E-56 | - |
| Gene3D | G3DSA:1.10.238.10 | - | 372 | 465 | 1.0E-59 | - |
| Gene3D | G3DSA:1.10.238.10 | - | 382 | 534 | 1.0E-59 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 98 | 182 | 3.3E-27 | - |
| SMART | SM00220 | serkin_6 | 97 | 356 | 1.3E-96 | IPR000719 |
| SMART | SM00054 | efh_1 | 509 | 537 | 1.2E-5 | IPR002048 |
| SMART | SM00054 | efh_1 | 403 | 431 | 1.0E-5 | IPR002048 |
| SMART | SM00054 | efh_1 | 439 | 467 | 5.9E-4 | IPR002048 |
| SMART | SM00054 | efh_1 | 475 | 503 | 3.1E-4 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 399 | 434 | 15.099209 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 471 | 506 | 15.294476 | IPR002048 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 97 | 356 | 47.170116 | IPR000719 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 435 | 470 | 10.189618 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 507 | 540 | 11.947029 | IPR002048 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 217 | 229 | - | IPR008271 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 484 | 496 | - | IPR018247 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 412 | 424 | - | IPR018247 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 448 | 460 | - | IPR018247 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 518 | 530 | - | IPR018247 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 103 | 130 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 74 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G04870.1 | calcium dependent protein kinase 1. A calcium-dependent protein kinase that can phosphorylate phenylalanine ammonia lyase (PAL), a key enzyme in pathogen defense. | 0 |
| RefSeq | XP_037436496.1 | calcium-dependent protein kinase 11-like [Triticum dicoccoides] | 0 |
| Q852N6 | Calcium-dependent protein kinase 11 OS=Oryza sativa subsp. japonica OX=39947 GN=CPK11 PE=3 SV=1 | 0 | |
| TrEMBL | A0A3B6KN97 | Calcium-dependent protein kinase 20 OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC5AG061750.