Basic Information
Locus ID:
gene:TRIDC5AG061660
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
RING-type zinc-finger
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 5A | 606933060 | 606933682 | + | gene:TRIDC5AG061660 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.97 | 21,735.39 Da | 51.98 | 69.13 | -0.31 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16454 | RING-H2_PA-TM-RING | 138 | 181 | 9.92232E-22 | - |
| Pfam | PF13639 | Ring finger domain | 139 | 181 | 4.6E-14 | IPR001841 |
| SUPERFAMILY | SSF57850 | RING/U-box | 138 | 187 | 7.88E-22 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 100 | 185 | 2.4E-21 | IPR013083 |
| SMART | SM00184 | ring_2 | 139 | 180 | 1.7E-8 | IPR001841 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 139 | 181 | 13.182669 | IPR001841 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 21 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 66 | 102 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G06490.1 | RING/U-box superfamily protein. | 0 |
| RefSeq | XP_037431526.1 | putative RING-H2 finger protein ATL71 [Triticum dicoccoides] | 0 |
| Q9FG21 | Putative RING-H2 finger protein ATL71 OS=Arabidopsis thaliana OX=3702 GN=ATL71 PE=3 SV=1 | 0 | |
| TrEMBL | A0A3B6KRC7 | RING-type domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC5AG061660.