Basic Information
Locus ID:
gene:TRIDC5AG061530
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Belongs to the cullin family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 5A | 605825054 | 605831664 | + | gene:TRIDC5AG061530 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.18 | 71,085.40 Da | 43.34 | 95.28 | -0.34 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00888 | Cullin family | 1 | 515 | 1.4E-181 | IPR001373 |
| Pfam | PF10557 | Cullin protein neddylation domain | 546 | 605 | 6.1E-23 | IPR019559 |
| SUPERFAMILY | SSF46785 | Winged helix DNA-binding domain | 526 | 614 | 3.86E-27 | IPR036390 |
| SUPERFAMILY | SSF74788 | Cullin repeat-like | 1 | 254 | 1.41E-77 | IPR016159 |
| SUPERFAMILY | SSF75632 | Cullin homology domain | 255 | 525 | 1.24E-100 | IPR036317 |
| Gene3D | G3DSA:1.10.10.10 | - | 541 | 614 | 1.8E-31 | IPR036388 |
| Gene3D | G3DSA:3.30.230.130 | Cullin; Chain C, Domain 2 | 373 | 529 | 1.1E-55 | - |
| Gene3D | G3DSA:1.20.1310.10 | Cullin Repeats | 39 | 153 | 3.2E-36 | - |
| Gene3D | G3DSA:1.20.1310.10 | Cullin Repeats | 257 | 368 | 4.2E-48 | - |
| Gene3D | G3DSA:1.20.1310.10 | Cullin Repeats | 154 | 256 | 8.5E-27 | - |
| SMART | SM00884 | Cullin_Nedd8_2 | 543 | 608 | 7.4E-34 | IPR019559 |
| SMART | SM00182 | cul_2 | 288 | 437 | 5.1E-75 | IPR016158 |
| ProSiteProfiles | PS50069 | Cullin family profile. | 258 | 487 | 58.264931 | IPR016158 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G46210.1 | cullin4. Arabidopsis CULLIN4 (CUL4) forms an E3 ubiquitin ligase with the CDD complex and a common catalytic subunit RBX1 in mediating light control of development. This CUL4-based E3 ligase is essential for the repression of photomorphogenesis. The partial loss of CUL4 function resulted in a constitutive photomorphogenic phenotype with respect to morphogenesis and light-regulated gene expression. CUL4 exhibits a synergistic genetic interaction with COP10 and DET1. | 0 |
| RefSeq | XP_044383307.1 | cullin-4-like [Triticum aestivum] | 0 |
| Q8LGH4 | Cullin-4 OS=Arabidopsis thaliana OX=3702 GN=CUL4 PE=1 SV=1 | 0 | |
| TrEMBL | A0A3B6KQV4 | CULLIN_2 domain-containing protein OS=Triticum aestivum OX=4565 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC5AG061530.