Basic Information
Locus ID:
gene:TRIDC5AG057660
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
serine threonine-protein kinase ctr1
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 5A | 586367345 | 586376483 | + | gene:TRIDC5AG057660 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.84 | 81,125.60 Da | 49.06 | 72.67 | -0.59 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00130 | PAS | 81 | 183 | 5.03187E-15 | IPR000014 |
| CDD | cd13999 | STKc_MAP3K-like | 446 | 692 | 5.64311E-129 | - |
| Pfam | PF00989 | PAS fold | 77 | 182 | 3.3E-14 | IPR013767 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 441 | 692 | 7.9E-68 | IPR001245 |
| SUPERFAMILY | SSF55785 | PYP-like sensor domain (PAS domain) | 77 | 179 | 2.09E-21 | IPR035965 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 420 | 692 | 4.93E-82 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 433 | 517 | 2.7E-29 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 518 | 719 | 4.5E-63 | - |
| Gene3D | G3DSA:3.30.450.20 | PAS domain | 82 | 187 | 4.6E-22 | - |
| SMART | SM00091 | pas_2 | 72 | 139 | 4.4E-8 | IPR000014 |
| SMART | SM00220 | serkin_6 | 440 | 700 | 1.1E-58 | IPR000719 |
| TIGRFAM | TIGR00229 | sensory_box: PAS domain S-box protein | 77 | 185 | 2.7E-15 | IPR000014 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 440 | 695 | 43.820358 | IPR000719 |
| ProSiteProfiles | PS50112 | PAS repeat profile. | 77 | 141 | 15.672405 | IPR000014 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 559 | 571 | - | IPR008271 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 663 | 685 | 2.6E-12 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 600 | 610 | 2.6E-12 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 553 | 571 | 2.6E-12 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 619 | 641 | 2.6E-12 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 514 | 527 | 2.6E-12 | IPR001245 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 299 | 324 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 194 | 236 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 336 | 375 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 23 | 61 | - | - |
| Coils | Coil | Coil | 685 | 705 | - | - |
| Coils | Coil | Coil | 3 | 23 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G49470.3 | PAS domain-containing protein tyrosine kinase family protein. | 0 |
| RefSeq | XP_037436212.1 | dual specificity protein kinase shkD-like isoform X1 [Triticum dicoccoides] | 0 |
| Q05609 | Serine/threonine-protein kinase CTR1 OS=Arabidopsis thaliana OX=3702 GN=CTR1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A3B6KM71 | PAS domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC5AG057660.