Basic Information
Locus ID:
gene:TRIDC5AG056730
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 5A | 580297665 | 580301254 | - | gene:TRIDC5AG056730 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.40 | 106,603.81 Da | 34.26 | 109.18 | 0.20 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13855 | Leucine rich repeat | 372 | 431 | 5.8E-7 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 36 | 75 | 1.3E-9 | IPR013210 |
| Pfam | PF00560 | Leucine Rich Repeat | 542 | 563 | 0.21 | IPR001611 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 709 | 913 | 6.1E-41 | IPR001245 |
| Pfam | PF13855 | Leucine rich repeat | 177 | 237 | 1.5E-7 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 446 | 503 | 1.4E-9 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 105 | 163 | 9.5E-7 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 300 | 356 | 4.6E-7 | IPR001611 |
| SUPERFAMILY | SSF52058 | L domain-like | 64 | 380 | 5.1E-57 | - |
| SUPERFAMILY | SSF52058 | L domain-like | 381 | 630 | 2.35E-59 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 680 | 977 | 2.16E-72 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 781 | 977 | 4.7E-52 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 193 | 264 | 4.6E-10 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 668 | 780 | 1.6E-24 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 364 | 641 | 8.2E-83 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 35 | 192 | 2.9E-42 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 265 | 363 | 2.2E-25 | IPR032675 |
| SMART | SM00369 | LRR_typ_2 | 563 | 586 | 140.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 539 | 562 | 11.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 224 | 247 | 11.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 467 | 491 | 51.0 | IPR003591 |
| SMART | SM00220 | serkin_6 | 705 | 952 | 1.2E-29 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 175 | 199 | 35.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 587 | 612 | 250.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 419 | 443 | 210.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 322 | 346 | 16.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 126 | 149 | 22.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 150 | 174 | 65.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 705 | 977 | 36.357609 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 826 | 838 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 711 | 733 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G47090.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_037436125.1 | probable LRR receptor-like serine/threonine-protein kinase At3g47570 [Triticum dicoccoides] | 0 |
| C0LGP4 | Probable LRR receptor-like serine/threonine-protein kinase At3g47570 OS=Arabidopsis thaliana OX=3702 GN=At3g47570 PE=2 SV=1 | 0 | |
| TrEMBL | A0A3B6KPL3 | Protein kinase domain-containing protein OS=Triticum aestivum OX=4565 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC5AG056730.