Basic Information
Locus ID:
gene:TRIDC5AG056510
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Inhibitor of growth proteins N-terminal histone-binding
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 5A | 579633297 | 579639011 | + | gene:TRIDC5AG056510 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.09 | 29,324.65 Da | 56.50 | 67.29 | -0.69 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd15505 | PHD_ING | 207 | 254 | 1.97449E-25 | - |
| CDD | cd17015 | ING_plant | 17 | 115 | 2.23185E-29 | - |
| Pfam | PF12998 | Inhibitor of growth proteins N-terminal histone-binding | 9 | 116 | 1.5E-17 | IPR024610 |
| Pfam | PF00628 | PHD-finger | 207 | 256 | 2.6E-7 | IPR019787 |
| SUPERFAMILY | SSF57903 | FYVE/PHD zinc finger | 192 | 255 | 5.18E-20 | IPR011011 |
| Gene3D | G3DSA:6.10.140.1740 | - | 5 | 116 | 3.2E-21 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 198 | 257 | 1.8E-25 | IPR013083 |
| SMART | SM00249 | PHD_3 | 207 | 255 | 1.7E-10 | IPR001965 |
| SMART | SM01408 | ING_2 | 9 | 118 | 3.0E-28 | IPR024610 |
| ProSiteProfiles | PS50016 | Zinc finger PHD-type profile. | 205 | 257 | 9.0539 | IPR019787 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 143 | 165 | - | - |
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G54390.3 | PHD finger protein-related. ING2 encodes a member of the Inhibitor of Growth family of nuclear-localized PhD domain containing homeodomain proteins. Binds to H3K4 di or trimethylated DNA. | 0 |
| RefSeq | XP_037436116.1 | PHD finger protein ING2-like isoform X2 [Triticum dicoccoides] | 0 |
| B3H615 | PHD finger protein ING2 OS=Arabidopsis thaliana OX=3702 GN=ING2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A453LT15 | PHD finger protein ING OS=Aegilops tauschii subsp. strangulata OX=200361 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC5AG056510.