Basic Information
Locus ID:
gene:TRIDC5AG056030
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Beige/BEACH domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 5A | 576193229 | 576211356 | - | gene:TRIDC5AG056030 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.67 | 391,996.00 Da | 43.31 | 93.87 | -0.14 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd06071 | Beach | 2909 | 3188 | 3.64153E-153 | IPR000409 |
| CDD | cd01201 | PH_BEACH | 2708 | 2873 | 1.09936E-24 | IPR023362 |
| Pfam | PF14844 | PH domain associated with Beige/BEACH | 2817 | 2870 | 2.0E-6 | IPR023362 |
| Pfam | PF00400 | WD domain, G-beta repeat | 3318 | 3350 | 0.0026 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 3478 | 3512 | 0.18 | IPR001680 |
| Pfam | PF02138 | Beige/BEACH domain | 2909 | 3188 | 4.9E-117 | IPR000409 |
| Pfam | PF00400 | WD domain, G-beta repeat | 3272 | 3301 | 0.19 | IPR001680 |
| SUPERFAMILY | SSF50729 | PH domain-like | 2708 | 2874 | 4.12E-15 | - |
| SUPERFAMILY | SSF48371 | ARM repeat | 136 | 514 | 1.48E-5 | IPR016024 |
| SUPERFAMILY | SSF81837 | BEACH domain | 2901 | 3188 | 3.79E-122 | IPR036372 |
| SUPERFAMILY | SSF48371 | ARM repeat | 527 | 959 | 1.54E-9 | IPR016024 |
| SUPERFAMILY | SSF50978 | WD40 repeat-like | 3242 | 3516 | 2.65E-28 | IPR036322 |
| SUPERFAMILY | SSF49899 | Concanavalin A-like lectins/glucanases | 1027 | 1216 | 1.13E-11 | IPR013320 |
| Gene3D | G3DSA:2.60.120.200 | - | 1021 | 1209 | 8.0E-8 | - |
| Gene3D | G3DSA:2.30.29.30 | - | 2709 | 2870 | 4.3E-7 | IPR011993 |
| Gene3D | G3DSA:2.130.10.10 | - | 3271 | 3521 | 2.3E-26 | IPR015943 |
| Gene3D | G3DSA:1.10.1540.10 | BEACH domain | 2898 | 3188 | 6.7E-136 | IPR036372 |
| Gene3D | G3DSA:1.25.10.10 | - | 437 | 967 | 1.1E-10 | IPR011989 |
| SMART | SM00320 | WD40_4 | 3261 | 3302 | 0.37 | IPR001680 |
| SMART | SM01026 | Beach_2 | 2908 | 3188 | 5.7E-201 | IPR000409 |
| SMART | SM00320 | WD40_4 | 3474 | 3513 | 0.008 | IPR001680 |
| SMART | SM00320 | WD40_4 | 3311 | 3350 | 1.1E-4 | IPR001680 |
| SMART | SM00320 | WD40_4 | 3402 | 3440 | 81.0 | IPR001680 |
| ProSiteProfiles | PS51783 | BEACH-type PH domain profile. | 2705 | 2871 | 28.669949 | IPR023362 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 3481 | 3522 | 9.338814 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 3318 | 3351 | 11.44416 | IPR001680 |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 3481 | 3522 | 9.230148 | - |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 3318 | 3351 | 9.572873 | - |
| ProSiteProfiles | PS50197 | BEACH domain profile. | 2896 | 3188 | 136.770355 | IPR000409 |
| ProSitePatterns | PS00678 | Trp-Asp (WD) repeats signature. | 3337 | 3351 | - | IPR019775 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1918 | 1949 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 399 | 421 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 2662 | 2679 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 2662 | 2691 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 399 | 420 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G03060.1 | Beige/BEACH domain ;WD domain, G-beta repeat protein. Encodes a WD/BEACH domain protein involved in cell morphogenesis. | 0 |
| RefSeq | XP_037436087.1 | protein SPIRRIG-like [Triticum dicoccoides] | 0 |
| F4HZB2 | Protein SPIRRIG OS=Arabidopsis thaliana OX=3702 GN=SPI PE=1 SV=1 | 0 | |
| TrEMBL | A0A3B6KPF7 | Protein SPIRRIG OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC5AG056030.