Basic Information
Locus ID:
gene:TRIDC5AG056000
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Ethylene-responsive protein kinase Le-CTR1
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 5A | 576029414 | 576037944 | - | gene:TRIDC5AG056000 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.26 | 117,601.47 Da | 51.46 | 87.71 | -0.34 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF14381 | Ethylene-responsive protein kinase Le-CTR1 | 599 | 662 | 1.5E-10 | - |
| Pfam | PF00069 | Protein kinase domain | 750 | 1033 | 5.7E-35 | IPR000719 |
| Pfam | PF13855 | Leucine rich repeat | 83 | 139 | 2.7E-8 | IPR001611 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 713 | 1035 | 2.83E-47 | IPR011009 |
| SUPERFAMILY | SSF52047 | RNI-like | 10 | 188 | 1.41E-28 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 709 | 1040 | 3.1E-43 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 1 | 236 | 7.6E-33 | IPR032675 |
| SMART | SM00369 | LRR_typ_2 | 149 | 172 | 2.2 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 126 | 148 | 25.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 173 | 199 | 370.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 103 | 125 | 2.4 | IPR003591 |
| SMART | SM00220 | serkin_6 | 715 | 1037 | 1.9E-25 | IPR000719 |
| SMART | SM00365 | LRR_sd22_2 | 103 | 121 | 38.0 | - |
| SMART | SM00364 | LRR_bac_2 | 126 | 145 | 21.0 | - |
| SMART | SM00365 | LRR_sd22_2 | 149 | 170 | 14.0 | - |
| SMART | SM00364 | LRR_bac_2 | 149 | 168 | 110.0 | - |
| SMART | SM00364 | LRR_bac_2 | 103 | 122 | 35.0 | - |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 151 | 172 | 8.366514 | IPR001611 |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 105 | 126 | 8.258705 | IPR001611 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 715 | 1041 | 30.930151 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 856 | 868 | - | IPR008271 |
| PRINTS | PR00019 | Leucine-rich repeat signature | 106 | 119 | 4.1E-5 | - |
| PRINTS | PR00019 | Leucine-rich repeat signature | 149 | 162 | 4.1E-5 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 412 | 431 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G04210.1 | Leucine-rich repeat protein kinase family protein. Encodes a putative Raf-related kinase. | 0 |
| RefSeq | XP_037436084.1 | uncharacterized protein LOC119303100 [Triticum dicoccoides] | 0 |
| Q5VT25 | Serine/threonine-protein kinase MRCK alpha OS=Homo sapiens OX=9606 GN=CDC42BPA PE=1 SV=1 | 0 | |
| TrEMBL | A0A8R7ULH4 | Protein kinase domain-containing protein OS=Triticum urartu OX=4572 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC5AG056000.