Basic Information
Locus ID:
gene:TRIDC5AG055790
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
protein modification by small protein conjugation or removal
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 5A | 574467015 | 574470717 | + | gene:TRIDC5AG055790 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.68 | 31,327.11 Da | 36.71 | 80.82 | -0.21 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00121 | MATH | 27 | 156 | 1.30044E-37 | IPR002083 |
| Pfam | PF00917 | MATH domain | 44 | 157 | 1.1E-11 | IPR002083 |
| Pfam | PF00651 | BTB/POZ domain | 182 | 264 | 1.1E-18 | IPR000210 |
| SUPERFAMILY | SSF54695 | POZ domain | 168 | 260 | 2.16E-23 | IPR011333 |
| SUPERFAMILY | SSF49599 | TRAF domain-like | 27 | 162 | 2.94E-37 | - |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 163 | 272 | 4.9E-28 | IPR011333 |
| Gene3D | G3DSA:2.60.210.10 | Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A | 27 | 159 | 2.4E-35 | IPR008974 |
| SMART | SM00061 | math_3 | 31 | 139 | 1.4E-8 | IPR002083 |
| SMART | SM00225 | BTB_4 | 191 | 279 | 2.3E-7 | IPR000210 |
| ProSiteProfiles | PS50144 | MATH/TRAF domain profile. | 26 | 156 | 25.530411 | IPR002083 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 191 | 259 | 17.065695 | IPR000210 |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G19000.1 | BTB-POZ and MATH domain 1. | 0 |
| RefSeq | XP_044393749.1 | BTB/POZ and MATH domain-containing protein 1-like [Triticum aestivum] | 0 |
| Q8L765 | BTB/POZ and MATH domain-containing protein 1 OS=Arabidopsis thaliana OX=3702 GN=BPM1 PE=1 SV=1 | 0 | |
| TrEMBL | M7YMA6 | BTB/POZ and MATH domain-containing protein 1 OS=Triticum urartu OX=4572 GN=TRIUR3_08962 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC5AG055790.