Basic Information
Locus ID:
gene:TRIDC5AG055490
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Belongs to the NPH3 family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 5A | 571825413 | 571828180 | + | gene:TRIDC5AG055490 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.54 | 69,166.01 Da | 58.56 | 75.62 | -0.38 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF03000 | NPH3 family | 223 | 490 | 3.3E-84 | IPR027356 |
| SUPERFAMILY | SSF54695 | POZ domain | 16 | 160 | 1.65E-14 | IPR011333 |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 15 | 193 | 3.9E-10 | IPR011333 |
| SMART | SM00225 | BTB_4 | 24 | 167 | 3.3E-4 | IPR000210 |
| ProSiteProfiles | PS51649 | NPH3 domain profile. | 222 | 514 | 88.828377 | IPR027356 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 81 | 99 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 50 | 71 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 49 | 111 | - | - |
| Coils | Coil | Coil | 73 | 97 | - | - |
| Coils | Coil | Coil | 554 | 574 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G66560.1 | Phototropic-responsive NPH3 family protein. | 0 |
| RefSeq | XP_037436056.1 | BTB/POZ domain-containing protein At5g66560-like [Triticum dicoccoides] | 0 |
| Q94A73 | BTB/POZ domain-containing protein At5g66560 OS=Arabidopsis thaliana OX=3702 GN=At5g66560 PE=2 SV=2 | 0 | |
| TrEMBL | A0A8R7UJ37 | NPH3 domain-containing protein OS=Triticum urartu OX=4572 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC5AG055490.