Basic Information
Locus ID:
gene:TRIDC5AG055360
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Zinc finger, C3HC4 type (RING finger)
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 5A | 570948465 | 570953583 | + | gene:TRIDC5AG055360 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.97 | 48,357.90 Da | 69.60 | 59.45 | -1.02 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16525 | RING-HC_PCGF | 100 | 142 | 3.35784E-16 | - |
| Pfam | PF13923 | Zinc finger, C3HC4 type (RING finger) | 101 | 141 | 1.0E-8 | - |
| SUPERFAMILY | SSF57850 | RING/U-box | 96 | 152 | 3.09E-10 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 87 | 193 | 1.1E-18 | IPR013083 |
| SMART | SM00184 | ring_2 | 101 | 141 | 1.9E-6 | IPR001841 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 101 | 142 | 11.840146 | IPR001841 |
| ProSitePatterns | PS00518 | Zinc finger RING-type signature. | 117 | 126 | - | IPR017907 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 84 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 48 | 62 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 175 | 196 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 15 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 336 | 358 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 198 | 214 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 310 | 379 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 33 | 47 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 310 | 335 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 175 | 286 | - | - |
| Coils | Coil | Coil | 36 | 66 | - | - |
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G30580.3 | - | 0 |
| RefSeq | XP_037436049.1 | E3 ubiquitin protein ligase DRIP2-like isoform X2 [Triticum dicoccoides] | 0 |
| Q94AY3 | E3 ubiquitin protein ligase DRIP2 OS=Arabidopsis thaliana OX=3702 GN=DRIP2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A3B6KME2 | RING-type domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC5AG055360.