Basic Information
Locus ID:
gene:TRIDC5AG055320
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Short Name:
IAA16
Description:
Aux IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 5A | 570917946 | 570919977 | + | gene:TRIDC5AG055320 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.05 | 25,583.69 Da | 56.19 | 70.00 | -0.40 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF02309 | AUX/IAA family | 127 | 231 | 2.3E-53 | IPR033389 |
| SUPERFAMILY | SSF54277 | CAD & PB1 domains | 124 | 221 | 2.45E-16 | - |
| Gene3D | G3DSA:3.10.20.90 | - | 123 | 234 | 3.4E-36 | - |
| ProSiteProfiles | PS51745 | PB1 domain profile. | 127 | 222 | 18.479559 | IPR000270 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 49 | 111 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 35 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 81 | 96 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G04730.1 | indoleacetic acid-induced protein 16. early auxin-induced (IAA16) | 0 |
| RefSeq | XP_037436047.1 | auxin-responsive protein IAA30-like isoform X2 [Triticum dicoccoides] | 0 |
| Q75GK0 | Auxin-responsive protein IAA11 OS=Oryza sativa subsp. japonica OX=39947 GN=IAA11 PE=2 SV=1 | 0 | |
| TrEMBL | A0A3B6KLK3 | Auxin-responsive protein OS=Triticum aestivum OX=4565 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC5AG055320.