Basic Information
Locus ID:
gene:TRIDC5AG054940
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Belongs to the NPH3 family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 5A | 568854565 | 568859160 | + | gene:TRIDC5AG054940 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.36 | 70,302.29 Da | 48.67 | 89.87 | -0.20 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd18312 | BTB_POZ_NPY3-like | 24 | 126 | 9.12911E-45 | - |
| Pfam | PF03000 | NPH3 family | 216 | 471 | 1.8E-91 | IPR027356 |
| Pfam | PF00651 | BTB/POZ domain | 32 | 118 | 1.9E-9 | IPR000210 |
| SUPERFAMILY | SSF54695 | POZ domain | 21 | 118 | 1.26E-17 | IPR011333 |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 19 | 137 | 6.1E-15 | IPR011333 |
| SMART | SM00225 | BTB_4 | 33 | 129 | 3.5E-4 | IPR000210 |
| ProSiteProfiles | PS51649 | NPH3 domain profile. | 216 | 495 | 92.566193 | IPR027356 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 33 | 101 | 12.701794 | IPR000210 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 595 | 615 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 595 | 634 | - | - |
| Coils | Coil | Coil | 609 | 634 | - | - |
| Coils | Coil | Coil | 538 | 572 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G30440.1 | Phototropic-responsive NPH3 family protein. | 0 |
| RefSeq | XP_037436003.1 | BTB/POZ domain-containing protein At1g30440-like isoform X1 [Triticum dicoccoides] | 0 |
| Q9S9Q9 | BTB/POZ domain-containing protein At1g30440 OS=Arabidopsis thaliana OX=3702 GN=At1g30440 PE=1 SV=2 | 0 | |
| TrEMBL | A0A3B6KMA2 | BTB/POZ domain-containing protein At1g30440 OS=Triticum aestivum OX=4565 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC5AG054940.