Basic Information
Locus ID:
gene:TRIDC5AG051910
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
F-box kelch-repeat protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 5A | 553781955 | 553783808 | - | gene:TRIDC5AG051910 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.25 | 62,124.00 Da | 54.74 | 78.83 | -0.21 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF01344 | Kelch motif | 373 | 403 | 1.3E-4 | IPR006652 |
| Pfam | PF00646 | F-box domain | 131 | 166 | 3.2E-11 | IPR001810 |
| Pfam | PF01344 | Kelch motif | 228 | 280 | 1.0E-8 | IPR006652 |
| SUPERFAMILY | SSF117281 | Kelch motif | 185 | 528 | 3.27E-28 | IPR015915 |
| SUPERFAMILY | SSF81383 | F-box domain | 130 | 187 | 6.54E-15 | IPR036047 |
| Gene3D | G3DSA:1.20.1280.50 | - | 127 | 173 | 2.6E-10 | - |
| Gene3D | G3DSA:2.120.10.80 | - | 317 | 564 | 4.9E-13 | IPR015915 |
| Gene3D | G3DSA:2.120.10.80 | - | 181 | 297 | 7.7E-13 | IPR015915 |
| SMART | SM00612 | kelc_smart | 239 | 293 | 0.0082 | IPR006652 |
| SMART | SM00256 | fbox_2 | 135 | 175 | 1.8E-8 | IPR001810 |
| SMART | SM00612 | kelc_smart | 372 | 419 | 0.24 | IPR006652 |
| ProSiteProfiles | PS50181 | F-box domain profile. | 129 | 175 | 11.828977 | IPR001810 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 26 | 42 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 71 | 91 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 17 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 44 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 348 | 369 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G42350.1 | Galactose oxidase/kelch repeat superfamily protein. | 0 |
| RefSeq | XP_037435786.1 | F-box/kelch-repeat protein At5g42350-like [Triticum dicoccoides] | 0 |
| Q9FII2 | F-box/kelch-repeat protein At5g42350 OS=Arabidopsis thaliana OX=3702 GN=At5g42350 PE=2 SV=1 | 0 | |
| TrEMBL | A0A3B6KNB8 | F-box domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC5AG051910.