Basic Information
Locus ID:
gene:TRIDC5AG051290
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Bulb-type mannose-specific lectin
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 5A | 549348038 | 549428101 | - | gene:TRIDC5AG051290 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.74 | 93,399.39 Da | 38.60 | 85.18 | -0.14 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd01098 | PAN_AP_plant | 757 | 840 | 7.22469E-17 | - |
| CDD | cd00028 | B_lectin | 438 | 561 | 1.15129E-26 | IPR001480 |
| CDD | cd14066 | STKc_IRAK | 92 | 357 | 1.76321E-92 | - |
| Pfam | PF01453 | D-mannose binding lectin | 480 | 589 | 4.8E-28 | IPR001480 |
| Pfam | PF08276 | PAN-like domain | 760 | 823 | 2.2E-14 | IPR003609 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 90 | 352 | 1.1E-48 | IPR001245 |
| Pfam | PF00954 | S-locus glycoprotein domain | 622 | 736 | 3.8E-21 | IPR000858 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 71 | 355 | 3.51E-81 | IPR011009 |
| SUPERFAMILY | SSF51110 | alpha-D-mannose-specific plant lectins | 481 | 594 | 1.19E-24 | IPR036426 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 55 | 160 | 2.1E-36 | - |
| Gene3D | G3DSA:2.90.10.10 | - | 426 | 560 | 1.7E-18 | IPR036426 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 161 | 365 | 5.3E-56 | - |
| SMART | SM00220 | serkin_6 | 86 | 353 | 1.9E-29 | IPR000719 |
| SMART | SM00108 | blect_4 | 436 | 562 | 4.9E-28 | IPR001480 |
| ProSiteProfiles | PS50927 | Bulb-type lectin domain profile. | 430 | 560 | 17.197624 | IPR001480 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 86 | 362 | 37.912346 | IPR000719 |
| ProSiteProfiles | PS50948 | PAN/Apple domain profile. | 759 | 840 | 8.903208 | IPR003609 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 206 | 218 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 92 | 113 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G21390.1 | S-locus lectin protein kinase family protein. | 0 |
| RefSeq | XP_044445543.1 | S-locus-specific glycoprotein S13-like [Triticum aestivum] | 0 |
| O81906 | G-type lectin S-receptor-like serine/threonine-protein kinase B120 OS=Arabidopsis thaliana OX=3702 GN=B120 PE=2 SV=1 | 0 | |
| TrEMBL | A0A0D3H9S2 | non-specific serine/threonine protein kinase OS=Oryza barthii OX=65489 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC5AG051290.