Basic Information
Locus ID:
gene:TRIDC5AG048360
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Endonuclease/Exonuclease/phosphatase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 5A | 532984687 | 532986002 | - | gene:TRIDC5AG048360 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.22 | 41,582.79 Da | 40.87 | 78.51 | -0.21 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00121 | MATH | 9 | 142 | 8.18482E-27 | IPR002083 |
| Pfam | PF00917 | MATH domain | 24 | 141 | 1.3E-5 | IPR002083 |
| Pfam | PF00651 | BTB/POZ domain | 167 | 247 | 1.5E-18 | IPR000210 |
| SUPERFAMILY | SSF54695 | POZ domain | 158 | 300 | 3.34E-28 | IPR011333 |
| SUPERFAMILY | SSF49599 | TRAF domain-like | 8 | 145 | 5.23E-32 | - |
| Gene3D | G3DSA:2.60.210.10 | Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A | 9 | 146 | 1.4E-28 | IPR008974 |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 157 | 295 | 3.1E-33 | IPR011333 |
| Gene3D | G3DSA:1.25.40.420 | - | 299 | 369 | 4.2E-18 | - |
| SMART | SM00225 | BTB_4 | 175 | 300 | 9.9E-21 | IPR000210 |
| ProSiteProfiles | PS50144 | MATH/TRAF domain profile. | 8 | 142 | 18.396521 | IPR002083 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 175 | 244 | 17.107059 | IPR000210 |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G06190.1 | BTB-POZ and MATH domain 2. | 0 |
| RefSeq | XP_037435603.1 | BTB/POZ and MATH domain-containing protein 2-like [Triticum dicoccoides] | 0 |
| Q9M8J9 | BTB/POZ and MATH domain-containing protein 2 OS=Arabidopsis thaliana OX=3702 GN=BPM2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A3B6KKU2 | BTB domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC5AG048360.