Basic Information
Locus ID:
gene:TRIDC5AG046970
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
RING-type E3 ubiquitin transferase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 5A | 524067017 | 524070197 | - | gene:TRIDC5AG046970 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.91 | 54,257.75 Da | 39.53 | 93.86 | -0.11 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF04564 | U-box domain | 108 | 172 | 3.9E-11 | IPR003613 |
| SUPERFAMILY | SSF57850 | RING/U-box | 99 | 174 | 3.53E-16 | - |
| SUPERFAMILY | SSF48371 | ARM repeat | 201 | 453 | 1.96E-8 | IPR016024 |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 94 | 174 | 3.0E-15 | IPR013083 |
| Gene3D | G3DSA:1.25.10.10 | - | 193 | 412 | 1.4E-8 | IPR011989 |
| SMART | SM00504 | Ubox_2 | 108 | 167 | 6.2E-7 | IPR003613 |
| ProSiteProfiles | PS51698 | U-box domain profile. | 114 | 174 | 10.7316 | IPR003613 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G18320.1 | ARM repeat superfamily protein. | 0 |
| RefSeq | XP_037435507.1 | U-box domain-containing protein 73-like [Triticum dicoccoides] | 0 |
| Q6K762 | U-box domain-containing protein 73 OS=Oryza sativa subsp. japonica OX=39947 GN=PUB73 PE=2 SV=1 | 0 | |
| TrEMBL | A0A3B6KM89 | RING-type E3 ubiquitin transferase OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC5AG046970.