Basic Information
Locus ID:
gene:TRIDC5AG046530
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
UBX domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 5A | 520168832 | 520174966 | - | gene:TRIDC5AG046530 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.46 | 61,651.80 Da | 64.81 | 68.47 | -0.79 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14351 | UBA_Ubx1_like | 6 | 42 | 5.56727E-14 | - |
| CDD | cd01767 | UBX | 478 | 552 | 1.07077E-18 | - |
| Pfam | PF00789 | UBX domain | 473 | 552 | 4.6E-17 | IPR001012 |
| Pfam | PF14555 | UBA-like domain | 6 | 47 | 5.8E-13 | - |
| SUPERFAMILY | SSF46934 | UBA-like | 1 | 44 | 4.08E-7 | IPR009060 |
| SUPERFAMILY | SSF54236 | Ubiquitin-like | 436 | 553 | 6.46E-22 | IPR029071 |
| Gene3D | G3DSA:1.10.8.10 | - | 1 | 49 | 4.4E-8 | - |
| Gene3D | G3DSA:3.10.20.90 | - | 473 | 554 | 2.9E-24 | - |
| SMART | SM00166 | ubx_3 | 469 | 553 | 2.8E-9 | IPR001012 |
| ProSiteProfiles | PS50033 | UBX domain profile. | 472 | 550 | 19.15731 | IPR001012 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 432 | 453 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 165 | 192 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 170 | 185 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 308 | 323 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 224 | 323 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 233 | 251 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 284 | 299 | - | - |
| Coils | Coil | Coil | 208 | 231 | - | - |
| Coils | Coil | Coil | 402 | 464 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G11740.1 | Ubiquitin-like superfamily protein. Isolated as a suppressor of a dominant mutant in the Ara4 gene that was expressed in yeast ypt1 mutant strains. A novel protein with a small region of similarity to coil-coiled domain of yeast VSP27 protein. | 0 |
| RefSeq | XP_037435467.1 | plant UBX domain-containing protein 8-like [Triticum dicoccoides] | 0 |
| F4JPR7 | Plant UBX domain-containing protein 8 OS=Arabidopsis thaliana OX=3702 GN=PUX8 PE=1 SV=1 | 0 | |
| TrEMBL | A0A3B6KM36 | UBX domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC5AG046530.