Basic Information
Locus ID:
gene:TRIDC5AG044610
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Short Name:
CPK24
Description:
EF hand
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 5A | 501142392 | 501145984 | - | gene:TRIDC5AG044610 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.46 | 61,194.92 Da | 51.01 | 78.72 | -0.45 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00051 | EFh | 460 | 519 | 1.03231E-16 | IPR002048 |
| CDD | cd05117 | STKc_CAMK | 75 | 337 | 3.22003E-122 | - |
| Pfam | PF13499 | EF-hand domain pair | 388 | 445 | 7.9E-10 | IPR002048 |
| Pfam | PF13499 | EF-hand domain pair | 458 | 519 | 4.4E-14 | IPR002048 |
| Pfam | PF00069 | Protein kinase domain | 76 | 338 | 5.0E-67 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 73 | 346 | 5.93E-79 | IPR011009 |
| SUPERFAMILY | SSF47473 | EF-hand | 362 | 532 | 4.33E-42 | IPR011992 |
| Gene3D | G3DSA:1.10.238.10 | - | 348 | 522 | 1.4E-49 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 166 | 347 | 1.0E-58 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 78 | 165 | 7.1E-23 | - |
| SMART | SM00054 | efh_1 | 421 | 449 | 0.05 | IPR002048 |
| SMART | SM00054 | efh_1 | 457 | 485 | 0.0012 | IPR002048 |
| SMART | SM00054 | efh_1 | 493 | 521 | 2.0E-5 | IPR002048 |
| SMART | SM00054 | efh_1 | 385 | 413 | 0.0071 | IPR002048 |
| SMART | SM00220 | serkin_6 | 76 | 338 | 7.0E-85 | IPR000719 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 381 | 416 | 15.266581 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 453 | 488 | 13.453381 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 417 | 452 | 9.57592 | IPR002048 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 76 | 338 | 45.756718 | IPR000719 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 489 | 524 | 13.481276 | IPR002048 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 394 | 406 | - | IPR018247 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 502 | 514 | - | IPR018247 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 82 | 105 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 200 | 212 | - | IPR008271 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 466 | 478 | - | IPR018247 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 430 | 442 | - | IPR018247 |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G51850.1 | calcium-dependent protein kinase 13. member of Calcium Dependent Protein Kinase | 0 |
| RefSeq | XP_037435219.1 | calcium-dependent protein kinase 22-like [Triticum dicoccoides] | 0 |
| Q69IM9 | Calcium-dependent protein kinase 22 OS=Oryza sativa subsp. japonica OX=39947 GN=CPK22 PE=3 SV=1 | 0 | |
| TrEMBL | A0A3B6KLI5 | Calcium-dependent protein kinase 24 OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC5AG044610.