Basic Information
Locus ID:
gene:TRIDC5AG044080
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
U-box domain-containing protein 33
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 5A | 498816726 | 498828132 | + | gene:TRIDC5AG044080 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.99 | 97,503.38 Da | 46.73 | 75.99 | -0.52 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd01989 | STK_N | 45 | 197 | 9.09959E-38 | - |
| CDD | cd16655 | RING-Ubox_WDSUB1_like | 809 | 849 | 1.07935E-21 | - |
| Pfam | PF04564 | U-box domain | 806 | 876 | 3.4E-17 | IPR003613 |
| Pfam | PF00069 | Protein kinase domain | 530 | 784 | 4.1E-45 | IPR000719 |
| SUPERFAMILY | SSF57850 | RING/U-box | 799 | 874 | 9.71E-22 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 510 | 786 | 1.62E-70 | IPR011009 |
| SUPERFAMILY | SSF52402 | Adenine nucleotide alpha hydrolases-like | 56 | 186 | 9.21E-8 | - |
| Gene3D | G3DSA:3.40.50.620 | HUPs | 45 | 173 | 3.5E-8 | IPR014729 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 513 | 601 | 9.4E-29 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 804 | 877 | 2.8E-24 | IPR013083 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 602 | 797 | 5.7E-51 | - |
| SMART | SM00220 | serkin_6 | 529 | 796 | 6.2E-34 | IPR000719 |
| SMART | SM00504 | Ubox_2 | 808 | 871 | 1.3E-22 | IPR003613 |
| ProSiteProfiles | PS51698 | U-box domain profile. | 804 | 877 | 24.115145 | IPR003613 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 529 | 796 | 34.802868 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 647 | 659 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 21 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 287 | 306 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 326 | 345 | - | - |
| Coils | Coil | Coil | 452 | 500 | - | - |
| Coils | Coil | Coil | 424 | 444 | - | - |
| Coils | Coil | Coil | 377 | 408 | - | - |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G45910.1 | U-box domain-containing protein kinase family protein. | 0 |
| RefSeq | XP_037435189.1 | U-box domain-containing protein 33-like isoform X1 [Triticum dicoccoides] | 0 |
| Q8GUH1 | U-box domain-containing protein 33 OS=Arabidopsis thaliana OX=3702 GN=PUB33 PE=2 SV=2 | 0 | |
| TrEMBL | A0A3B6KLG5 | RING-type E3 ubiquitin transferase OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC5AG044080.