halophFGD

Basic Information

Locus ID: gene:TRIDC5AG042790

Species & Taxonomic ID: Triticum dicoccoides & 85692

Genome Assembly: GCF_002162155.2

Description: Belongs to the protein kinase superfamily. Ser Thr protein kinase family

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
5A	488083597	488086744	+	gene:TRIDC5AG042790

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
6.83	109,981.77 Da	43.58	107.66	0.09

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
Pfam	PF13855	Leucine rich repeat	173	232	4.3E-7	IPR001611
Pfam	PF00560	Leucine Rich Repeat	348	370	1.4	IPR001611
Pfam	PF08263	Leucine rich repeat N-terminal domain	34	69	2.7E-11	IPR013210
Pfam	PF00069	Protein kinase domain	706	923	1.8E-37	IPR000719
SUPERFAMILY	SSF52047	RNI-like	265	603	3.14E-58	-
SUPERFAMILY	SSF56112	Protein kinase-like (PK-like)	678	1004	7.48E-61	IPR011009
SUPERFAMILY	SSF52058	L domain-like	34	291	6.91E-58	-
Gene3D	G3DSA:3.30.200.20	Phosphorylase Kinase; domain 1	675	788	1.2E-17	-
Gene3D	G3DSA:3.80.10.10	Ribonuclease Inhibitor	341	646	9.2E-82	IPR032675
Gene3D	G3DSA:1.10.510.10	Transferase(Phosphotransferase) domain 1	790	1017	1.9E-50	-
Gene3D	G3DSA:3.80.10.10	Ribonuclease Inhibitor	31	188	1.4E-47	IPR032675
Gene3D	G3DSA:3.80.10.10	Ribonuclease Inhibitor	189	340	1.9E-37	IPR032675
SMART	SM00369	LRR_typ_2	516	540	110.0	IPR003591
SMART	SM00369	LRR_typ_2	171	194	170.0	IPR003591
SMART	SM00365	LRR_sd22_2	346	372	30.0	-
SMART	SM00365	LRR_sd22_2	419	451	620.0	-
SMART	SM00365	LRR_sd22_2	564	590	20.0	-
SMART	SM00365	LRR_sd22_2	171	197	610.0	-
SMART	SM00369	LRR_typ_2	395	418	330.0	IPR003591
SMART	SM00369	LRR_typ_2	564	587	57.0	IPR003591
SMART	SM00369	LRR_typ_2	99	122	240.0	IPR003591
SMART	SM00369	LRR_typ_2	588	613	300.0	IPR003591
SMART	SM00220	serkin_6	704	1018	5.0E-28	IPR000719
SMART	SM00369	LRR_typ_2	443	467	170.0	IPR003591
SMART	SM00369	LRR_typ_2	316	339	48.0	IPR003591
SMART	SM00369	LRR_typ_2	123	147	14.0	IPR003591
SMART	SM00369	LRR_typ_2	419	442	120.0	IPR003591
SMART	SM00369	LRR_typ_2	243	267	190.0	IPR003591
SMART	SM00369	LRR_typ_2	195	219	24.0	IPR003591
ProSiteProfiles	PS50011	Protein kinase domain profile.	704	1018	33.403603	IPR000719
ProSiteProfiles	PS51257	Prokaryotic membrane lipoprotein lipid attachment site profile.	1	16	5.0	-
ProSitePatterns	PS00108	Serine/Threonine protein kinases active-site signature.	836	848	-	IPR008271
ProSitePatterns	PS00107	Protein kinases ATP-binding region signature.	710	737	-	IPR017441
PRINTS	PR00019	Leucine-rich repeat signature	564	577	6.1E-5	-
PRINTS	PR00019	Leucine-rich repeat signature	349	362	6.1E-5	-

Gene Ontology

Biological Process:

GO:0006468 (protein phosphorylation)

Molecular Function:

GO:0004672 (protein kinase activity) GO:0005515 (protein binding) GO:0005524 (ATP binding)

KEGG Pathway

KO Term:

K04730 (interleukin-1 receptor-associated kinase 1 [EC:2.7.11.1])

Pathway:

ko04010 (MAPK signaling pathway) map04010 (MAPK signaling pathway) map04064 (NF-kappa B signaling pathway) map04620 (Toll-like receptor signaling pathway) ko04624 (Toll and Imd signaling pathway) map04624 (Toll and Imd signaling pathway)

Best hit

Source	Best Hit ID	Description
TAIR	AT3G47110.1	Leucine-rich repeat protein kinase family protein.
RefSeq	XP_037435121.1	receptor kinase-like protein Xa21 [Triticum dicoccoides]
Swiss-Prot	Q1MX30	Receptor kinase-like protein Xa21 OS=Oryza sativa subsp. indica OX=39946 GN=XA21 PE=1 SV=1
TrEMBL	A0A8R7QGT6	Protein kinase domain-containing protein OS=Triticum urartu OX=4572 PE=3 SV=1

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
No sample metadata found.

Network

No network data available for this species.

Orthology

No orthogroup found for gene:TRIDC5AG042790.