Basic Information
Locus ID:
gene:TRIDC5AG041180
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Anaphase-promoting complex subunit 4 WD40 domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 5A | 476845362 | 476848946 | + | gene:TRIDC5AG041180 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.68 | 51,203.75 Da | 47.99 | 72.14 | -0.47 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00200 | WD40 | 167 | 439 | 4.45189E-45 | - |
| Pfam | PF12894 | Anaphase-promoting complex subunit 4 WD40 domain | 184 | 242 | 9.4E-7 | IPR024977 |
| Pfam | PF00400 | WD domain, G-beta repeat | 316 | 354 | 0.0055 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 404 | 439 | 1.5E-4 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 265 | 300 | 9.9E-7 | IPR001680 |
| SUPERFAMILY | SSF50978 | WD40 repeat-like | 159 | 439 | 1.69E-59 | IPR036322 |
| Gene3D | G3DSA:2.130.10.10 | - | 93 | 442 | 3.8E-125 | IPR015943 |
| SMART | SM00320 | WD40_4 | 261 | 300 | 6.5E-9 | IPR001680 |
| SMART | SM00320 | WD40_4 | 219 | 257 | 1.3 | IPR001680 |
| SMART | SM00320 | WD40_4 | 400 | 439 | 1.1E-6 | IPR001680 |
| SMART | SM00320 | WD40_4 | 357 | 397 | 290.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 177 | 216 | 1.4E-4 | IPR001680 |
| SMART | SM00320 | WD40_4 | 312 | 354 | 2.0E-4 | IPR001680 |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 268 | 302 | 11.708317 | - |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 407 | 440 | 13.081652 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 184 | 225 | 12.01227 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 268 | 309 | 14.719144 | IPR001680 |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 184 | 221 | 8.808332 | - |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 407 | 440 | 10.864685 | - |
| ProSitePatterns | PS00678 | Trp-Asp (WD) repeats signature. | 426 | 440 | - | IPR019775 |
| ProSitePatterns | PS00678 | Trp-Asp (WD) repeats signature. | 287 | 301 | - | IPR019775 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 16 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 41 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G33270.1 | Transducin family protein / WD-40 repeat family protein. putative cdc20 protein (CDC20.1) | 0 |
| RefSeq | XP_037435011.1 | cell division cycle 20.2, cofactor of APC complex-like [Triticum dicoccoides] | 0 |
| Q9SZA4 | Cell division cycle 20.1, cofactor of APC complex OS=Arabidopsis thaliana OX=3702 GN=CDC20-1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8R7UJM0 | ANAPC4_WD40 domain-containing protein OS=Triticum urartu OX=4572 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC5AG041180.