Basic Information
Locus ID:
gene:TRIDC5AG040400
Species & Taxonomic ID:
Triticum dicoccoides & 85692
Genome Assembly:
GCF_002162155.2
Description:
Ubiquitin family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 5A | 472210284 | 472210883 | + | gene:TRIDC5AG040400 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.10 | 20,869.24 Da | 44.74 | 73.02 | -0.15 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd17039 | Ubl_ubiquitin_like | 5 | 77 | 1.48898E-9 | - |
| Pfam | PF00240 | Ubiquitin family | 15 | 79 | 3.3E-5 | IPR000626 |
| SUPERFAMILY | SSF54236 | Ubiquitin-like | 14 | 80 | 2.99E-9 | IPR029071 |
| Gene3D | G3DSA:3.10.20.90 | - | 1 | 103 | 2.6E-8 | - |
| ProSiteProfiles | PS50053 | Ubiquitin domain profile. | 1 | 79 | 10.396963 | IPR000626 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 80 | 102 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 80 | 105 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G05230.1 | Ubiquitin-like superfamily protein. | 0 |
| RefSeq | XP_037430725.1 | uncharacterized protein LOC119296738 [Triticum dicoccoides] | 0 |
| TrEMBL | A0A3B6KKU5 | Ubiquitin-like domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene:TRIDC5AG040400.